Os11g0464700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0464700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56 | 0.352 | 2.77 | 0.00344 | 0.0902 | -0.0191 | 0.156 | -1.44 | 0.13 | 7 | 29.97 | 8 | -- | -- |
| 56.46 | 0.35 | 2.78 | -0.131 | 0.0882 | -0.155 | 0.144 | -- | 0.121 | 7.04 | 29.7 | 30 | -- | -- |
| 56.04 | 0.349 | 2.77 | 0.00546 | 0.0901 | -0.0111 | -- | -1.42 | 0.129 | 7.69 | 29.9 | 7 | -- | -- |
| 56.53 | 0.35 | 2.78 | -0.124 | 0.0895 | -0.142 | -- | -- | 0.118 | 7.23 | 29.7 | 30 | -- | -- |
| 56.47 | 0.35 | 2.77 | 0.00381 | -- | -0.00421 | -- | -1.36 | 0.129 | -- | 29.92 | 7 | -- | -- |
| 57.15 | 0.354 | 2.78 | -0.104 | 0.0767 | -- | 0.0605 | -- | 0.109 | 8.99 | -- | -- | -- | -- |
| 57.16 | 0.354 | 2.78 | -0.102 | 0.0762 | -- | -- | -- | 0.109 | 9.18 | -- | -- | -- | -- |
| 56.95 | 0.351 | 2.78 | -0.121 | -- | -0.121 | -- | -- | 0.118 | -- | 29.78 | 30 | -- | -- |
| 56.93 | 0.351 | 2.78 | -- | 0.0834 | -0.126 | -- | -- | 0.127 | 7.42 | 29.8 | 30 | -- | -- |
| 57.5 | 0.354 | 2.78 | -0.102 | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
| 57.43 | 0.355 | 2.78 | -- | 0.0762 | -- | -- | -- | 0.12 | 9.28 | -- | -- | -- | -- |
| 57.32 | 0.353 | 2.78 | -- | -- | -0.11 | -- | -- | 0.13 | -- | 29.77 | 30 | -- | -- |
| 57.77 | 0.355 | 2.78 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.30 | temperature | 30.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 3 | 53.29 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 2 |
| 4 | 53.30 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 24 | 53.55 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 25 | 53.64 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 38 | 53.82 | temperature | 30.0 | 10 | > th | dose independent | rect. | 18 | 17 |
| 56 | 53.95 | temperature | 30.0 | 10 | < th | dose independent | sin | 9 | NA |
| 62 | 54.22 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 24 | 10 |
| 67 | 54.25 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 68 | 54.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 72 | 54.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 75 | 54.25 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 76 | 54.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 79 | 54.25 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 80 | 54.25 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 86 | 54.28 | humidity | 70.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 106 | 54.33 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 114 | 54.38 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 116 | 54.39 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 117 | 54.40 | radiation | 40.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 118 | 54.42 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 134 | 54.59 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 148 | 54.69 | humidity | 70.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 186 | 54.77 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 3 |
| 189 | 54.78 | radiation | 20.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 202 | 54.81 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 210 | 54.83 | humidity | 60.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 212 | 54.84 | wind | 5.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 215 | 54.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 218 | 54.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 221 | 54.85 | humidity | 90.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 222 | 54.85 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 225 | 54.85 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 227 | 54.85 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 230 | 54.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 1 |
| 231 | 54.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 234 | 54.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 236 | 54.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 239 | 54.86 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 23 |
| 242 | 54.87 | wind | 1.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 245 | 54.88 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 246 | 54.88 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 254 | 54.90 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 255 | 54.90 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 257 | 54.91 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 260 | 54.91 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 262 | 54.92 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 267 | 54.92 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 268 | 54.92 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 286 | 54.93 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 288 | 54.93 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 289 | 54.93 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 297 | 54.93 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 298 | 54.93 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 299 | 54.93 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 300 | 54.93 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 301 | 54.93 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 306 | 54.95 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 312 | 54.97 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 313 | 54.98 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 323 | 55.01 | temperature | 30.0 | 10 | > th | dose independent | rect. | 16 | 19 |
| 329 | 55.03 | temperature | 25.0 | 720 | > th | dose independent | rect. | 1 | 2 |
| 332 | 55.03 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 339 | 55.06 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 344 | 55.07 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 369 | 55.16 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 373 | 55.17 | radiation | 20.0 | 30 | > th | dose independent | rect. | 8 | 3 |
| 376 | 55.18 | temperature | 25.0 | 720 | < th | dose independent | rect. | 1 | 6 |
| 377 | 55.18 | temperature | 25.0 | 720 | > th | dose independent | rect. | 24 | 8 |
| 382 | 55.19 | temperature | 30.0 | 10 | > th | dose independent | sin | 9 | NA |
| 431 | 55.26 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 435 | 55.27 | wind | 1.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 487 | 55.37 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 23 |
| 494 | 55.40 | radiation | 40.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 514 | 55.41 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 523 | 55.43 | temperature | 25.0 | 720 | < th | dose independent | rect. | 3 | 1 |
| 529 | 55.43 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 552 | 55.46 | temperature | 25.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 564 | 55.48 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 3 |
| 572 | 55.50 | radiation | 20.0 | 90 | > th | dose independent | rect. | 16 | 18 |
| 682 | 55.61 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 716 | 55.64 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 4 |
| 742 | 55.66 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 16 | 19 |
| 794 | 55.69 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 842 | 55.70 | wind | 9.0 | 10 | < th | dose independent | rect. | 11 | 21 |
| 866 | 55.71 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 882 | 55.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 913 | 55.73 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 3 |
| 992 | 55.75 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 16 | 18 |
| 996 | 55.76 | humidity | 60.0 | 10 | > th | dose independent | rect. | 12 | 20 |