Os11g0462100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 18 protein.
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Os11g0462100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 18 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.29 | 0.582 | 3.13 | -0.56 | 0.279 | 5.33 | -0.268 | -33.6 | 0.0988 | 5.37 | 32.84 | 89 | -- | -- |
| 163.02 | 0.599 | 3.07 | 0.0392 | 0.216 | 1.01 | -0.385 | -- | 0.0846 | 5.08 | 32.84 | 89 | -- | -- |
| 153.05 | 0.576 | 3.12 | -0.473 | 0.276 | 5.48 | -- | -33.3 | 0.103 | 5.47 | 33.2 | 100 | -- | -- |
| 158.71 | 0.587 | 3.06 | 0.016 | 0.303 | 1.35 | -- | -- | 0.104 | 5.58 | 33.3 | 159 | -- | -- |
| 156.76 | 0.583 | 3.13 | -0.46 | -- | 5.37 | -- | -33.9 | 0.098 | -- | 33.3 | 100 | -- | -- |
| 166.76 | 0.605 | 3.07 | 0.0627 | 0.177 | -- | -0.481 | -- | 0.0717 | 5.18 | -- | -- | -- | -- |
| 167.27 | 0.606 | 3.07 | 0.0635 | 0.179 | -- | -- | -- | 0.0743 | 5.94 | -- | -- | -- | -- |
| 162.62 | 0.594 | 3.07 | 0.0441 | -- | 1.31 | -- | -- | 0.103 | -- | 33.9 | 163 | -- | -- |
| 158.71 | 0.587 | 3.06 | -- | 0.291 | 1.37 | -- | -- | 0.099 | 5.64 | 33.35 | 159 | -- | -- |
| 168.92 | 0.607 | 3.07 | 0.0688 | -- | -- | -- | -- | 0.0784 | -- | -- | -- | -- | -- |
| 167.37 | 0.605 | 3.07 | -- | 0.18 | -- | -- | -- | 0.0672 | 5.92 | -- | -- | -- | -- |
| 162.66 | 0.594 | 3.07 | -- | -- | 1.3 | -- | -- | 0.0961 | -- | 33.9 | 163 | -- | -- |
| 169.05 | 0.607 | 3.08 | -- | -- | -- | -- | -- | 0.0708 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.05 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 4 | 154.55 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 6 | 154.63 | humidity | 50.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 7 | 154.65 | humidity | 50.0 | 10 | < th | dose independent | rect. | 11 | 6 |
| 27 | 154.67 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 30 | 154.71 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 31 | 154.71 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 33 | 154.72 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 34 | 154.72 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 55 | 154.74 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 75 | 154.78 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 76 | 154.78 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 77 | 154.78 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 13 | 4 |
| 80 | 154.79 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 83 | 154.79 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 86 | 154.79 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 87 | 154.79 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 89 | 154.79 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 94 | 154.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 95 | 154.79 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 96 | 154.79 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 101 | 154.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 107 | 154.86 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 3 |
| 109 | 154.95 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 146 | 155.03 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 162 | 155.09 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 164 | 155.27 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 176 | 155.64 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 181 | 155.78 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 187 | 155.86 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 13 | 2 |
| 224 | 156.41 | temperature | 30.0 | 10 | > th | dose dependent | sin | 15 | NA |
| 260 | 156.70 | radiation | 40.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 279 | 156.85 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 7 |
| 285 | 156.87 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 12 | 2 |
| 286 | 156.88 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 5 |
| 290 | 156.90 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 291 | 156.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 294 | 156.90 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 298 | 156.90 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 307 | 156.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 308 | 156.90 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 329 | 156.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 332 | 156.90 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 339 | 156.90 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 351 | 156.91 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 15 | 3 |
| 355 | 156.92 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 387 | 157.00 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 434 | 157.10 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 15 | 19 |
| 477 | 157.48 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 4 |
| 478 | 157.49 | radiation | 40.0 | 270 | > th | dose independent | rect. | 13 | 21 |
| 479 | 157.50 | radiation | 30.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 565 | 157.74 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 605 | 157.96 | radiation | 40.0 | 10 | > th | dose independent | rect. | 14 | 21 |
| 633 | 158.13 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 637 | 158.16 | humidity | 70.0 | 10 | < th | dose independent | rect. | 15 | 3 |
| 678 | 158.22 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 15 | 19 |
| 759 | 158.40 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 760 | 158.41 | radiation | 40.0 | 10 | > th | dose independent | sin | 11 | NA |
| 791 | 158.56 | humidity | 50.0 | 30 | < th | dose independent | sin | 6 | NA |
| 796 | 158.57 | wind | 5.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 820 | 158.61 | humidity | 70.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 823 | 158.62 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 864 | 158.68 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 865 | 158.68 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 919 | 158.68 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 8 | 2 |
| 984 | 158.74 | temperature | 30.0 | 90 | > th | dose dependent | no | NA | NA |