Os11g0461000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S10, serine carboxypeptidase family protein.
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Os11g0461000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S10, serine carboxypeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.51 | 0.621 | 4.28 | -1.64 | 0.94 | 0.955 | -0.019 | 0.173 | -0.0325 | 7.37 | 84.05 | 1303 | -- | -- |
| 174.54 | 0.615 | 4.28 | -1.66 | 0.943 | 0.973 | -0.013 | -- | -0.0346 | 7.4 | 83.74 | 1292 | -- | -- |
| 174.51 | 0.615 | 4.28 | -1.64 | 0.942 | 0.96 | -- | 0.17 | -0.0325 | 7.4 | 84 | 1292 | -- | -- |
| 174.54 | 0.615 | 4.28 | -1.66 | 0.943 | 0.973 | -- | -- | -0.0343 | 7.4 | 83.78 | 1292 | -- | -- |
| 220.42 | 0.691 | 4.3 | -1.62 | -- | 0.989 | -- | 0.162 | -0.0282 | -- | 86 | 1366 | -- | -- |
| 196.02 | 0.656 | 4.29 | -1.52 | 0.967 | -- | -0.0453 | -- | -0.0551 | 6.83 | -- | -- | -- | -- |
| 196.03 | 0.656 | 4.29 | -1.52 | 0.967 | -- | -- | -- | -0.055 | 6.83 | -- | -- | -- | -- |
| 220.48 | 0.692 | 4.31 | -1.63 | -- | 1.01 | -- | -- | -0.0261 | -- | 85.82 | 1364 | -- | -- |
| 242.24 | 0.725 | 4.25 | -- | 0.917 | 0.797 | -- | -- | 0.0914 | 7.17 | 94 | 1383 | -- | -- |
| 245 | 0.731 | 4.31 | -1.5 | -- | -- | -- | -- | -0.0364 | -- | -- | -- | -- | -- |
| 256.91 | 0.75 | 4.25 | -- | 0.95 | -- | -- | -- | 0.114 | 6.93 | -- | -- | -- | -- |
| 286.67 | 0.789 | 4.28 | -- | -- | 0.865 | -- | -- | 0.104 | -- | 94 | 1377 | -- | -- |
| 304.24 | 0.814 | 4.27 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.44 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 15 | 166.49 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 22 | 167.15 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 28 | 167.59 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 47 | 168.18 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 48 | 168.28 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 66 | 169.31 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 90 | 169.54 | humidity | 80 | 1440 | < th | dose dependent | sin | 12 | NA |
| 104 | 169.97 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 119 | 170.20 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 124 | 170.34 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 138 | 170.75 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 278 | 172.18 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 279 | 172.18 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 314 | 172.54 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 317 | 172.55 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 323 | 172.59 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 326 | 172.60 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 360 | 172.79 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 377 | 172.89 | humidity | 70 | 1440 | < th | dose independent | sin | 13 | NA |
| 379 | 172.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 399 | 172.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 457 | 173.08 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 476 | 173.14 | humidity | 60 | 1440 | > th | dose independent | sin | 13 | NA |
| 539 | 173.35 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 698 | 173.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 726 | 174.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 753 | 174.10 | humidity | 50 | 1440 | > th | dose dependent | sin | 16 | NA |
| 764 | 174.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 952 | 174.89 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 996 | 175.02 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 1 |