Os11g0460500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0460500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 239.88 | 0.728 | 3.16 | -0.0397 | 0.168 | 0.775 | 0.907 | 2.47 | -0.222 | 19.4 | 1015 | 4530 | -- | -- |
| 244.42 | 0.728 | 3.13 | 0.322 | 0.17 | 0.41 | 1.05 | -- | -0.144 | 19.1 | 1014 | 6533 | -- | -- |
| 240.85 | 0.723 | 3.17 | -0.0142 | 0.202 | 1.95 | -- | 5.09 | -0.215 | 17.5 | 1016 | 4270 | -- | -- |
| 246.94 | 0.732 | 3.12 | 0.306 | 0.195 | 0.418 | -- | -- | -0.131 | 17.7 | 1014 | 6783 | -- | -- |
| 242.78 | 0.726 | 3.18 | -0.00859 | -- | 2.46 | -- | 6.17 | -0.219 | -- | 1016 | 4238 | -- | -- |
| 249.99 | 0.741 | 3.14 | 0.146 | 0.175 | -- | 1.01 | -- | -0.221 | 19.4 | -- | -- | -- | -- |
| 252.32 | 0.744 | 3.14 | 0.126 | 0.201 | -- | -- | -- | -0.217 | 17.7 | -- | -- | -- | -- |
| 248.91 | 0.735 | 3.11 | 0.302 | -- | 0.433 | -- | -- | -0.131 | -- | 1014 | 6595 | -- | -- |
| 249.02 | 0.735 | 3.13 | -- | 0.192 | 0.344 | -- | -- | -0.178 | 17.8 | 1014 | 6230 | -- | -- |
| 254.43 | 0.745 | 3.14 | 0.12 | -- | -- | -- | -- | -0.222 | -- | -- | -- | -- | -- |
| 252.74 | 0.744 | 3.14 | -- | 0.199 | -- | -- | -- | -0.231 | 17.8 | -- | -- | -- | -- |
| 250.9 | 0.738 | 3.13 | -- | -- | 0.35 | -- | -- | -0.181 | -- | 1014 | 6210 | -- | -- |
| 254.8 | 0.745 | 3.14 | -- | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 224.47 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 11 | 224.47 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 21 | 225.13 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 26 | 225.50 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 73 | 232.28 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 101 | 234.16 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 128 | 237.44 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 135 | 238.00 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 138 | 238.22 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 149 | 238.34 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 6 | 2 |
| 163 | 238.58 | wind | 1.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 181 | 239.17 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 182 | 239.27 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 184 | 239.46 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 185 | 239.46 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 9 |
| 205 | 239.46 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 226 | 239.48 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 3 |
| 227 | 239.48 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 229 | 239.49 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 232 | 239.50 | radiation | 20.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 234 | 239.50 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 2 | 19 |
| 235 | 239.51 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 238 | 239.52 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 15 |
| 240 | 239.54 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 246 | 239.58 | precipitation | 0.1 | 10 | < th | dose independent | sin | 18 | NA |
| 247 | 239.58 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 18 | NA |
| 248 | 239.58 | wind | 7.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 272 | 239.72 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 2 | 18 |
| 275 | 239.75 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 276 | 239.75 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 0 | NA |
| 284 | 239.77 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 2 | 18 |
| 303 | 239.82 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 6 | 14 |
| 305 | 239.82 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 317 | 239.83 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 328 | 239.87 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 333 | 239.88 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 2 | 6 |
| 343 | 239.89 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 2 | 6 |
| 351 | 239.90 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 6 | 14 |
| 371 | 239.94 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 395 | 239.97 | precipitation | 0.1 | 10 | > th | dose independent | sin | 18 | NA |
| 453 | 240.03 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 481 | 240.06 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 482 | 240.06 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 559 | 240.13 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 560 | 240.13 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 562 | 240.13 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 16 | 4 |
| 582 | 240.14 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 19 | NA |
| 602 | 240.17 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 631 | 240.20 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 644 | 240.21 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 10 |
| 647 | 240.21 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 2 | 2 |
| 708 | 240.27 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 7 |
| 739 | 240.30 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 18 | 19 |
| 758 | 240.31 | atmosphere | 1015.0 | 4320 | > th | dose dependent | no | NA | NA |
| 775 | 240.32 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 811 | 240.33 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 837 | 240.35 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 18 | 21 |
| 856 | 240.36 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 24 | 15 |
| 891 | 240.38 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 896 | 240.39 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 909 | 240.40 | wind | 3.0 | 720 | < th | dose independent | rect. | 12 | 1 |
| 931 | 240.42 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 943 | 240.43 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 947 | 240.43 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |