Os11g0459500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0459500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.15 | 0.415 | 8.46 | -0.521 | 0.717 | 1.43 | -1.36 | -2.04 | -0.36 | 1.07 | 18.92 | 1334 | -- | -- |
| 83.08 | 0.425 | 8.39 | -0.0867 | 0.732 | 1.49 | -1.46 | -- | -0.206 | 1.05 | 15.8 | 2823 | -- | -- |
| 84.17 | 0.427 | 8.46 | -0.606 | 0.722 | 1.54 | -- | -2.94 | -0.359 | 2.47 | 17.44 | 1032 | -- | -- |
| 91.1 | 0.445 | 8.39 | -0.0833 | 0.797 | 1.62 | -- | -- | -0.213 | 1.78 | 14.91 | 3327 | -- | -- |
| 105.65 | 0.479 | 8.47 | -0.655 | -- | 1.91 | -- | -2.94 | -0.418 | -- | 17.2 | 1051 | -- | -- |
| 130.83 | 0.536 | 8.32 | 0.538 | 0.858 | -- | -1.39 | -- | 0.099 | 1.27 | -- | -- | -- | -- |
| 138.46 | 0.551 | 8.32 | 0.584 | 0.866 | -- | -- | -- | 0.105 | 1.61 | -- | -- | -- | -- |
| 112.96 | 0.495 | 8.39 | -0.0443 | -- | 2.12 | -- | -- | -0.259 | -- | -0.09582 | 1083 | -- | -- |
| 91.26 | 0.445 | 8.38 | -- | 0.798 | 1.58 | -- | -- | -0.203 | 1.74 | 14.8 | 3305 | -- | -- |
| 184.3 | 0.634 | 8.3 | 0.619 | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
| 147.46 | 0.568 | 8.33 | -- | 0.877 | -- | -- | -- | 0.0402 | 1.63 | -- | -- | -- | -- |
| 112.86 | 0.495 | 8.38 | -- | -- | 2.08 | -- | -- | -0.234 | -- | 2.557 | 1079 | -- | -- |
| 194.42 | 0.651 | 8.32 | -- | -- | -- | -- | -- | 0.0557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.23 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 15 |
| 2 | 74.29 | temperature | 15.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 5 | 74.45 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 8 | 74.60 | temperature | 30.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 112 | 77.96 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 132 | 78.14 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 150 | 78.30 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 14 | 11 |
| 172 | 78.40 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 178 | 78.42 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 2 | 22 |
| 196 | 78.46 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 207 | 78.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 228 | 78.58 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 277 | 78.73 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 448 | 79.45 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 10 |
| 478 | 79.55 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 487 | 79.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 10 |
| 507 | 79.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 508 | 79.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 564 | 79.81 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 582 | 79.85 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 589 | 79.87 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 605 | 79.91 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 3 |
| 632 | 79.99 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 5 | 10 |
| 640 | 80.01 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 654 | 80.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 655 | 80.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 657 | 80.03 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 689 | 80.08 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 740 | 80.16 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 742 | 80.16 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 760 | 80.20 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 821 | 80.28 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 894 | 80.37 | temperature | 25.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 895 | 80.37 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 917 | 80.39 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 943 | 80.43 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 980 | 80.47 | temperature | 25.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 993 | 80.48 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 14 | NA |