Os11g0459400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0459400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.16 | 0.382 | 7.89 | -0.319 | 1.66 | -3.14 | 0.0685 | 2.34 | -0.586 | 8.8 | 31.26 | 694 | 1.15 | -- |
| 69.17 | 0.387 | 7.84 | -0.0821 | 2 | -3.42 | 1.38 | -- | -0.511 | 8.92 | 33.61 | 695 | 1.47 | -- |
| 65.82 | 0.378 | 7.87 | -0.277 | 1.86 | -3.3 | -- | 2.34 | -0.556 | 8.88 | 32.67 | 645 | 0.771 | -- |
| 76.16 | 0.406 | 7.83 | -0.0374 | 2.33 | -3.85 | -- | -- | -0.511 | 9.02 | 34.55 | 622 | 0.726 | -- |
| 93.87 | 0.451 | 7.93 | -0.293 | -- | -1.92 | -- | 2.05 | -0.531 | -- | 24.3 | 861 | 1.01 | -- |
| 140.56 | 0.556 | 7.81 | 0.452 | 0.562 | -- | -1.24 | -- | -0.13 | 3.04 | -- | -- | -- | -- |
| 143.6 | 0.561 | 7.8 | 0.478 | 0.606 | -- | -- | -- | -0.125 | 4.26 | -- | -- | -- | -- |
| 99.44 | 0.464 | 7.89 | -0.0187 | -- | -2.07 | -- | -- | -0.488 | -- | 24.18 | 954 | 1.33 | -- |
| 76.19 | 0.407 | 7.83 | -- | 2.38 | -3.89 | -- | -- | -0.503 | 9.06 | 35 | 622 | 0.728 | -- |
| 163.42 | 0.597 | 7.81 | 0.502 | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
| 149.62 | 0.572 | 7.82 | -- | 0.615 | -- | -- | -- | -0.178 | 4.25 | -- | -- | -- | -- |
| 99.44 | 0.464 | 7.89 | -- | -- | -2.06 | -- | -- | -0.488 | -- | 24.2 | 959 | 1.38 | -- |
| 170.08 | 0.609 | 7.82 | -- | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 3 | 65.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 12 | 66.96 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 17 | 67.55 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 40 | 68.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 57 | 69.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 59 | 69.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 101 | 71.38 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 173 | 73.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 297 | 76.68 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 8 |
| 329 | 77.22 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 371 | 78.07 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 404 | 78.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 477 | 80.17 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 489 | 80.30 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 588 | 82.15 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 632 | 82.74 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 14 |
| 678 | 83.44 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 7 |