Os11g0459200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0459200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.73 | 0.723 | 2.49 | 3.13 | 0.697 | -43.2 | -0.764 | 269 | 0.462 | 22.6 | 994.9 | 703 | -- | -- |
| 251.07 | 0.744 | 3.06 | -0.202 | 0.736 | 0.303 | -0.662 | -- | 0.445 | 22.6 | 994.9 | 703 | -- | -- |
| 238.33 | 0.719 | 2.51 | 3.08 | 0.707 | -43.1 | -- | 269 | 0.467 | 22.3 | 994.9 | 678 | -- | -- |
| 244.3 | 0.728 | 3.05 | -0.218 | 0.716 | 1.3 | -- | -- | 0.445 | 22.6 | 994.7 | 706 | -- | -- |
| 267.57 | 0.762 | 2.53 | 2.84 | -- | -43 | -- | 270 | 0.473 | -- | 994.7 | 689 | -- | -- |
| 251.17 | 0.743 | 3.06 | -0.2 | 0.736 | -- | -0.662 | -- | 0.444 | 22.6 | -- | -- | -- | -- |
| 252.97 | 0.745 | 3.06 | -0.173 | 0.74 | -- | -- | -- | 0.446 | 22.5 | -- | -- | -- | -- |
| 271.53 | 0.767 | 3.04 | -0.18 | -- | 3.89 | -- | -- | 0.458 | -- | 994.5 | 109 | -- | -- |
| 245.52 | 0.73 | 3.06 | -- | 0.708 | 1.24 | -- | -- | 0.45 | 22.6 | 994.7 | 705 | -- | -- |
| 286.62 | 0.791 | 3.04 | -0.16 | -- | -- | -- | -- | 0.45 | -- | -- | -- | -- | -- |
| 253.76 | 0.745 | 3.05 | -- | 0.739 | -- | -- | -- | 0.466 | 22.5 | -- | -- | -- | -- |
| 272.39 | 0.769 | 3.03 | -- | -- | 3.87 | -- | -- | 0.478 | -- | 994.6 | 108 | -- | -- |
| 287.29 | 0.791 | 3.03 | -- | -- | -- | -- | -- | 0.467 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 223.68 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 4 | 223.68 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 7 | 1 |
| 69 | 223.68 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 72 | 223.68 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 137 | 223.70 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 144 | 223.75 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 151 | 234.37 | radiation | 30 | 10 | > th | dose independent | rect. | 7 | 1 |
| 219 | 236.00 | atmosphere | 995 | 720 | < th | dose independent | sin | 6 | NA |
| 220 | 236.19 | atmosphere | 995 | 720 | < th | dose dependent | sin | 6 | NA |
| 222 | 236.36 | temperature | 30 | 30 | > th | dose independent | rect. | 18 | 1 |
| 223 | 236.36 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 253 | 236.50 | atmosphere | 995 | 720 | < th | dose independent | rect. | 14 | 1 |
| 314 | 236.50 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 392 | 236.87 | temperature | 30 | 30 | > th | dose dependent | rect. | 17 | 2 |
| 407 | 236.88 | atmosphere | 995 | 10 | > th | dose independent | sin | 8 | NA |
| 411 | 236.92 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 440 | 236.95 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 447 | 236.95 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 513 | 237.13 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 579 | 237.62 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 580 | 237.63 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 4 | 1 |
| 585 | 237.69 | temperature | 25 | 90 | > th | dose dependent | rect. | 24 | 8 |
| 589 | 237.77 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 24 | 3 |
| 593 | 237.84 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 1 |
| 600 | 237.84 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 642 | 238.01 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 645 | 238.02 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 1 |
| 647 | 238.02 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 1 |
| 679 | 238.20 | atmosphere | 995 | 720 | > th | dose independent | no | NA | NA |
| 680 | 238.20 | wind | 7 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 683 | 238.27 | atmosphere | 995 | 720 | < th | dose dependent | no | NA | NA |
| 894 | 238.38 | atmosphere | 995 | 720 | < th | dose independent | no | NA | NA |