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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0458100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.25 (0.0472) R2 : 0.000807
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0603 (0.0994) R2dN8 : 0.00104 R2N8 : 0.000807
σ : 0.889
deviance : 362.96
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
348.6 0.877 3.21 0.469 0.471 -0.834 -0.285 1.81 0.0609 13.3 25.21 100 -- --
349.8 0.871 3.23 0.277 0.436 -0.67 -0.21 -- 0.0167 13.3 25.16 145 -- --
348.9 0.87 3.21 0.427 0.472 -0.815 -- 1.59 0.0583 13.2 25.21 103 -- --
349.74 0.871 3.23 0.254 0.439 -0.681 -- -- 0.00239 13.3 25.2 127 -- --
354.28 0.877 3.23 0.387 -- -0.709 -- 1.38 -0.0517 -- 28.41 771 -- --
357.05 0.886 3.24 0.145 0.292 -- -0.177 -- -0.0433 10.8 -- -- -- --
357.18 0.885 3.24 0.138 0.293 -- -- -- -0.044 10.7 -- -- -- --
354.08 0.876 3.25 0.227 -- -0.565 -- -- -0.0754 -- 28.4 772 -- --
351.24 0.873 3.24 -- 0.426 -0.619 -- -- -0.0244 13 25.29 106 -- --
362.5 0.89 3.25 0.132 -- -- -- -- -0.0457 -- -- -- -- --
357.68 0.885 3.24 -- 0.292 -- -- -- -0.0593 10.7 -- -- -- --
355.38 0.878 3.26 -- -- -0.529 -- -- -0.0966 -- 28.5 769 -- --
362.96 0.889 3.25 -- -- -- -- -- -0.0603 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 331.28 wind 1.0 10 < th dose independent rect. 15 7
2 331.33 wind 1.0 10 < th dose independent rect. 17 5
4 331.34 wind 1.0 10 < th dose dependent rect. 15 7
5 331.36 wind 1.0 10 < th dose dependent rect. 17 5
7 331.37 wind 1.0 10 < th dose independent rect. 21 1
11 331.37 wind 1.0 10 < th dose dependent rect. 21 1
17 339.19 atmosphere 1000.0 90 < th dose independent rect. 5 2
18 339.19 atmosphere 1000.0 90 < th dose dependent rect. 5 2
21 340.27 atmosphere 1000.0 10 < th dose dependent rect. 5 3
27 340.67 atmosphere 1000.0 10 < th dose independent rect. 5 3
41 342.33 atmosphere 1000.0 10 < th dose independent rect. 5 1
48 342.33 atmosphere 1000.0 10 < th dose dependent rect. 5 1
55 342.37 humidity 90.0 43200 < th dose independent rect. 14 1
64 342.59 wind 1.0 4320 > th dose independent rect. 10 4
66 342.79 wind 1.0 4320 < th dose independent rect. 10 4
77 343.64 atmosphere 995.0 4320 > th dose independent rect. 20 4
79 343.71 humidity 90.0 43200 > th dose independent rect. 14 1
86 344.13 wind 1.0 4320 < th dose dependent rect. 10 4
89 344.24 wind 9.0 10 > th dose independent rect. 13 1
101 344.24 wind 9.0 10 > th dose dependent rect. 13 1
113 344.28 atmosphere 1010.0 90 > th dose dependent rect. 8 3
136 344.59 atmosphere 1010.0 270 > th dose dependent rect. 6 2
139 344.66 atmosphere 1010.0 270 > th dose dependent rect. 24 8
146 344.70 wind 1.0 720 < th dose independent rect. 10 6
155 344.92 wind 1.0 720 > th dose independent rect. 12 7
157 345.01 atmosphere 1005.0 90 < th dose dependent rect. 4 9
158 345.11 wind 1.0 720 < th dose dependent rect. 10 6
160 345.16 atmosphere 1010.0 270 > th dose independent rect. 5 3
175 345.35 atmosphere 995.0 4320 > th dose independent rect. 20 13
179 345.44 wind 1.0 720 < th dose independent rect. 13 1
183 345.50 wind 7.0 10 > th dose dependent rect. 21 13
193 345.62 wind 1.0 720 < th dose independent rect. 13 3
202 345.70 atmosphere 1015.0 1440 < th dose independent rect. 9 2
208 345.75 wind 1.0 720 < th dose dependent rect. 13 1
215 345.81 humidity 50.0 10 < th dose independent rect. 11 5
239 345.90 temperature 25.0 720 > th dose dependent rect. 1 8
240 345.91 wind 1.0 720 < th dose dependent rect. 13 3
246 345.97 temperature 20.0 720 > th dose dependent rect. 3 6
251 346.00 precipitation 0.1 270 > th dose independent rect. 20 1
255 346.00 precipitation 0.1 270 > th dose dependent rect. 20 1
258 346.02 humidity 80.0 43200 > th dose dependent rect. 14 1
264 346.08 atmosphere 1005.0 90 > th dose dependent rect. 19 3
273 346.18 temperature 25.0 720 > th dose independent rect. 7 2
277 346.21 atmosphere 1015.0 1440 > th dose dependent rect. 3 9
282 346.25 atmosphere 1015.0 1440 < th dose independent rect. 5 7
289 346.27 atmosphere 1015.0 1440 > th dose independent rect. 10 1
305 346.27 atmosphere 1015.0 1440 > th dose dependent rect. 10 1
325 346.33 wind 5.0 43200 < th dose dependent rect. 21 1
332 346.38 humidity 50.0 10 > th dose independent rect. 22 22
334 346.42 humidity 90.0 270 > th dose independent rect. 19 1
335 346.43 temperature 30.0 720 < th dose independent rect. 18 18
336 346.44 radiation 1.0 43200 > th dose dependent rect. 5 1
349 346.45 temperature 20.0 720 > th dose dependent rect. 22 11
360 346.52 temperature 25.0 720 > th dose dependent rect. 8 1
377 346.63 wind 1.0 720 < th dose dependent rect. 13 8
385 346.72 humidity 80.0 43200 > th dose dependent rect. 12 16
386 346.73 temperature 30.0 90 < th dose independent rect. 11 11
387 346.74 temperature 30.0 90 < th dose independent rect. 16 22
389 346.75 atmosphere 1015.0 1440 < th dose independent rect. 24 11
391 346.76 temperature 30.0 90 < th dose independent rect. 9 13
394 346.77 temperature 30.0 720 < th dose independent rect. 9 3
404 346.79 atmosphere 1005.0 10 > th dose dependent rect. 20 2
409 346.82 wind 5.0 43200 > th dose independent rect. 11 4
419 346.84 wind 5.0 43200 < th dose independent rect. 11 4
428 346.87 temperature 30.0 720 < th dose independent rect. 11 1
429 346.87 atmosphere 1000.0 10 < th dose independent rect. 5 7
432 346.89 humidity 60.0 270 < th dose dependent rect. 19 15
434 346.91 humidity 60.0 270 < th dose dependent rect. 8 2
461 346.94 temperature 10.0 720 > th dose dependent rect. 22 11
473 346.96 wind 7.0 10 > th dose independent rect. 21 13
489 347.01 wind 7.0 43200 > th dose dependent rect. 14 1
501 347.08 humidity 60.0 270 < th dose independent rect. 8 1
563 347.11 radiation 40.0 43200 < th dose dependent rect. 24 6
568 347.12 radiation 40.0 43200 < th dose independent rect. 14 18
578 347.15 humidity 80.0 270 > th dose independent rect. 17 2
588 347.17 wind 1.0 720 < th dose dependent rect. 10 11
589 347.18 wind 7.0 43200 > th dose independent rect. 13 2
591 347.18 radiation 10.0 43200 < th dose independent rect. 16 15
592 347.18 humidity 80.0 270 < th dose dependent rect. 3 5
598 347.19 wind 7.0 43200 < th dose independent rect. 13 2
613 347.22 radiation 10.0 43200 < th dose dependent rect. 4 2
614 347.22 radiation 40.0 43200 < th dose dependent rect. 4 2
615 347.22 radiation 10.0 43200 < th dose dependent rect. 2 4
616 347.22 radiation 40.0 43200 < th dose dependent rect. 2 4
619 347.22 radiation 10.0 43200 < th dose dependent rect. 19 11
654 347.25 radiation 10.0 43200 < th dose independent rect. 5 2
661 347.26 humidity 90.0 10 > th dose independent rect. 19 4
667 347.27 radiation 10.0 43200 < th dose independent rect. 24 7
677 347.28 humidity 90.0 43200 > th dose dependent rect. 23 1
689 347.29 radiation 20.0 43200 > th dose dependent rect. 16 16
691 347.30 humidity 90.0 90 > th dose independent rect. 19 3
706 347.34 humidity 50.0 10 < th dose dependent rect. 11 5
707 347.34 atmosphere 1005.0 90 > th dose dependent rect. 17 5
737 347.35 humidity 80.0 43200 > th dose dependent sin 15 NA
746 347.37 radiation 40.0 1440 < th dose independent rect. 16 14
747 347.37 temperature 20.0 270 < th dose dependent rect. 6 1
751 347.38 radiation 40.0 1440 < th dose independent rect. 16 4
752 347.38 humidity 90.0 90 > th dose independent rect. 17 5
769 347.41 wind 1.0 720 < th dose independent rect. 10 11
772 347.42 humidity 90.0 43200 < th dose independent rect. 21 7
773 347.43 wind 3.0 43200 < th dose independent rect. 21 1
783 347.44 temperature 30.0 720 < th dose independent rect. 1 11
784 347.44 humidity 60.0 270 < th dose independent rect. 19 15
786 347.45 atmosphere 995.0 4320 > th dose independent rect. 10 5
790 347.45 humidity 70.0 270 > th dose independent rect. 16 14
791 347.45 temperature 30.0 720 < th dose independent rect. 24 21
812 347.46 wind 3.0 43200 > th dose independent rect. 21 1
813 347.46 humidity 90.0 43200 < th dose independent rect. 14 15
828 347.47 temperature 25.0 90 > th dose dependent rect. 13 23
843 347.48 humidity 90.0 43200 > th dose independent rect. 13 16
869 347.53 atmosphere 995.0 4320 > th dose independent rect. 20 7
871 347.53 temperature 30.0 90 < th dose independent rect. 24 23
874 347.53 temperature 10.0 720 > th dose dependent rect. 3 6
876 347.54 radiation 10.0 43200 < th dose independent rect. 17 1
885 347.55 humidity 90.0 43200 < th dose independent rect. 20 9
887 347.55 humidity 80.0 43200 > th dose dependent rect. 20 4
898 347.58 radiation 20.0 43200 > th dose independent rect. 17 14
903 347.59 radiation 20.0 43200 > th dose independent rect. 6 1
916 347.59 humidity 90.0 43200 < th dose independent rect. 17 12
922 347.60 humidity 90.0 43200 > th dose independent rect. 21 8
928 347.61 humidity 60.0 1440 > th dose independent rect. 23 10
931 347.62 wind 5.0 43200 > th dose independent rect. 10 7
932 347.62 humidity 80.0 43200 > th dose independent rect. 3 13
936 347.63 temperature 30.0 90 > th dose independent rect. 16 22
938 347.64 atmosphere 1000.0 43200 < th dose independent rect. 4 1
939 347.64 radiation 40.0 720 > th dose independent rect. 15 1
997 347.68 radiation 40.0 43200 < th dose independent rect. 14 5