Os11g0456200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0456200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.91 | 0.235 | 9.03 | 0.133 | 0.288 | -0.0347 | 0.0835 | 3.62 | 0.0928 | 4.72 | 30.07 | 900 | -- | -- |
| 26.02 | 0.238 | 9.09 | -0.364 | 0.266 | 0.339 | 0.00139 | -- | 0.055 | 4.23 | 30.3 | 946 | -- | -- |
| 24.93 | 0.233 | 9.03 | 0.132 | 0.289 | -0.0362 | -- | 3.62 | 0.0921 | 4.67 | 30.07 | 900 | -- | -- |
| 25.92 | 0.237 | 9.09 | -0.372 | 0.287 | 0.337 | -- | -- | 0.0635 | 4.65 | 30.4 | 946 | -- | -- |
| 28.29 | 0.248 | 9.01 | 0.312 | -- | -0.112 | -- | 3.82 | 0.108 | -- | 30.16 | 1149 | -- | -- |
| 29.92 | 0.256 | 9.1 | -0.294 | 0.274 | -- | 0.0303 | -- | 0.0205 | 3.83 | -- | -- | -- | -- |
| 29.92 | 0.256 | 9.1 | -0.294 | 0.274 | -- | -- | -- | 0.0203 | 3.83 | -- | -- | -- | -- |
| 29.55 | 0.253 | 9.09 | -0.367 | -- | 0.311 | -- | -- | 0.0846 | -- | 30.39 | 1122 | -- | -- |
| 29.38 | 0.252 | 9.08 | -- | 0.281 | 0.293 | -- | -- | 0.103 | 4.64 | 30.33 | 922 | -- | -- |
| 34.06 | 0.273 | 9.1 | -0.283 | -- | -- | -- | -- | 0.0276 | -- | -- | -- | -- | -- |
| 32.2 | 0.265 | 9.09 | -- | 0.269 | -- | -- | -- | 0.0531 | 3.84 | -- | -- | -- | -- |
| 32.96 | 0.267 | 9.08 | -- | -- | 0.256 | -- | -- | 0.115 | -- | 30.78 | 1120 | -- | -- |
| 36.18 | 0.281 | 9.1 | -- | -- | -- | -- | -- | 0.059 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.37 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 4 | 24.37 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 25 | 24.67 | wind | 1 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 26 | 24.67 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 27 | 24.68 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 28 | 24.69 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 40 | 24.88 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 41 | 24.89 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 42 | 24.90 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 43 | 24.90 | wind | 1 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 44 | 24.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 45 | 24.92 | wind | 1 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 47 | 24.92 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 51 | 24.93 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 83 | 25.01 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 106 | 25.04 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 157 | 25.11 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 16 |
| 171 | 25.13 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 180 | 25.14 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 185 | 25.15 | temperature | 30 | 720 | > th | dose independent | rect. | 12 | 6 |
| 192 | 25.15 | wind | 9 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 220 | 25.18 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 250 | 25.20 | temperature | 30 | 720 | > th | dose independent | sin | 18 | NA |
| 262 | 25.21 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 286 | 25.24 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 293 | 25.25 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 2 |
| 315 | 25.25 | temperature | 20 | 90 | > th | dose dependent | sin | 14 | NA |
| 326 | 25.26 | temperature | 20 | 270 | > th | dose dependent | sin | 16 | NA |
| 334 | 25.27 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 21 | 15 |
| 342 | 25.28 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 23 |
| 343 | 25.28 | temperature | 30 | 720 | < th | dose independent | rect. | 12 | 23 |
| 348 | 25.29 | temperature | 30 | 720 | > th | dose independent | rect. | 15 | 2 |
| 376 | 25.31 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 463 | 25.34 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 470 | 25.34 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 23 |
| 481 | 25.35 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 23 |
| 519 | 25.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 551 | 25.39 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 7 | NA |
| 571 | 25.40 | temperature | 30 | 720 | > th | dose independent | no | NA | NA |
| 572 | 25.40 | temperature | 30 | 720 | < th | dose independent | no | NA | NA |
| 708 | 25.43 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 6 | NA |
| 717 | 25.43 | temperature | 30 | 720 | > th | dose independent | rect. | 15 | 23 |
| 735 | 25.44 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 793 | 25.46 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 10 |
| 839 | 25.49 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 865 | 25.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 926 | 25.53 | temperature | 30 | 720 | < th | dose independent | rect. | 13 | 16 |
| 941 | 25.54 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 956 | 25.54 | temperature | 30 | 720 | > th | dose dependent | rect. | 13 | 4 |
| 967 | 25.54 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 15 | 17 |