Os11g0454300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Water-stress inducible protein RAB21.
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Os11g0454300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Water-stress inducible protein RAB21.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 427.19 | 0.971 | 4.34 | -0.577 | 1.02 | 1.3 | 0.704 | 1.32 | -0.334 | 6.22 | 49.29 | 6152 | -- | -- |
| 429.12 | 0.965 | 4.36 | -0.595 | 1.02 | 1.67 | 0.704 | -- | -0.314 | 6.22 | 49.17 | 6085 | -- | -- |
| 428.4 | 0.964 | 4.34 | -0.57 | 1.03 | 1.3 | -- | 1.31 | -0.336 | 6.28 | 49.46 | 5998 | -- | -- |
| 430.34 | 0.966 | 4.36 | -0.588 | 1.02 | 1.67 | -- | -- | -0.317 | 6.27 | 49.52 | 6059 | -- | -- |
| 481.2 | 1.02 | 4.37 | -0.54 | -- | 1.31 | -- | 1.33 | -0.349 | -- | 49.5 | 6852 | -- | -- |
| 469 | 1.02 | 4.39 | -0.101 | 1.02 | -- | 0.76 | -- | -0.446 | 6.1 | -- | -- | -- | -- |
| 470.38 | 1.02 | 4.39 | -0.0928 | 1.03 | -- | -- | -- | -0.449 | 6.19 | -- | -- | -- | -- |
| 483.95 | 1.02 | 4.39 | -0.532 | -- | 1.6 | -- | -- | -0.344 | -- | 49 | 6847 | -- | -- |
| 438.18 | 0.975 | 4.35 | -- | 1.02 | 1.4 | -- | -- | -0.282 | 6.28 | 49.49 | 6065 | -- | -- |
| 525.25 | 1.07 | 4.41 | -0.0643 | -- | -- | -- | -- | -0.426 | -- | -- | -- | -- | -- |
| 470.6 | 1.01 | 4.39 | -- | 1.03 | -- | -- | -- | -0.439 | 6.19 | -- | -- | -- | -- |
| 490.55 | 1.03 | 4.38 | -- | -- | 1.37 | -- | -- | -0.307 | -- | 49.02 | 6844 | -- | -- |
| 525.36 | 1.07 | 4.41 | -- | -- | -- | -- | -- | -0.419 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 412.53 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 2 | 412.86 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 4 | 413.28 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 5 | 413.28 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 33 | 416.52 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 41 | 417.34 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 46 | 417.53 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 56 | 417.97 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 57 | 418.01 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 90 | 418.85 | wind | 5 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 91 | 418.86 | wind | 3 | 14400 | < th | dose independent | sin | 6 | NA |
| 96 | 419.00 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 114 | 419.36 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 124 | 419.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 133 | 419.64 | wind | 5 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 135 | 419.83 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 137 | 419.84 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 141 | 419.92 | wind | 3 | 14400 | > th | dose independent | sin | 6 | NA |
| 156 | 420.07 | wind | 3 | 14400 | < th | dose dependent | sin | 6 | NA |
| 164 | 420.22 | wind | 1 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 243 | 421.24 | humidity | 80 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 250 | 421.32 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 269 | 421.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 338 | 422.33 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 346 | 422.43 | wind | 9 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 365 | 422.63 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 392 | 422.91 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 415 | 423.07 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 419 | 423.10 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 421 | 423.10 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 442 | 423.34 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 450 | 423.46 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 557 | 424.31 | wind | 9 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 575 | 424.41 | humidity | 80 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 576 | 424.42 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 578 | 424.43 | wind | 9 | 14400 | < th | dose dependent | sin | 6 | NA |
| 583 | 424.45 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 596 | 424.57 | wind | 1 | 14400 | > th | dose dependent | sin | 6 | NA |
| 643 | 425.01 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 660 | 425.16 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 693 | 425.36 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 718 | 425.62 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 719 | 425.63 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 733 | 425.76 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 746 | 425.90 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 780 | 426.25 | humidity | 60 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 786 | 426.29 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 853 | 426.82 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |