Os11g0454000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dehydrin RAB 16C.
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Os11g0454000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dehydrin RAB 16C.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 384.57 | 0.921 | 8.65 | -9.19 | 0.365 | 5.86 | 0.52 | -8 | -0.479 | 23.5 | 21.43 | 1487 | 12.8 | -- |
| 423.91 | 0.959 | 8.32 | -7.23 | 0.831 | 7.74 | 0.831 | -- | 0.131 | 2.4 | 15.95 | 1567 | 14.4 | -- |
| 385.06 | 0.914 | 8.64 | -9.16 | 0.391 | 5.94 | -- | -7.91 | -0.445 | 23.5 | 21.4 | 1499 | 13.4 | -- |
| 421.31 | 0.956 | 8.4 | -7.43 | 1.59 | 8.86 | -- | -- | 0.0314 | 4.06 | 14.78 | 1674 | 14.8 | -- |
| 394.05 | 0.925 | 8.63 | -9.19 | -- | 5.87 | -- | -7.85 | -0.452 | -- | 21.4 | 1481 | 13.1 | -- |
| 1380.22 | 1.74 | 8.13 | -4.96 | 0.596 | -- | 0.517 | -- | 1.21 | 23.6 | -- | -- | -- | -- |
| 1381.32 | 1.74 | 8.13 | -4.98 | 0.595 | -- | -- | -- | 1.21 | 23.3 | -- | -- | -- | -- |
| 411.93 | 0.945 | 8.59 | -8.83 | -- | 7.97 | -- | -- | -0.687 | -- | 10.9 | 5609 | 19.8 | -- |
| 1534.86 | 1.82 | 8.11 | -- | 0.311 | 3.33 | -- | -- | 1.13 | 19.7 | 22.18 | 1485 | 8.94 | -- |
| 1403.52 | 1.75 | 8.12 | -4.97 | -- | -- | -- | -- | 1.21 | -- | -- | -- | -- | -- |
| 2036.04 | 2.11 | 8.01 | -- | 0.551 | -- | -- | -- | 1.76 | 22.8 | -- | -- | -- | -- |
| 1528.37 | 1.82 | 8.16 | -- | -- | 3.62 | -- | -- | 1.02 | -- | 22.2 | 1640 | 8.61 | -- |
| 2054.79 | 2.12 | 7.99 | -- | -- | -- | -- | -- | 1.76 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 380.11 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 2 | 381.39 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 13 | 385.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 19 | 385.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 24 | 391.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 32 | 395.22 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 36 | 395.81 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 37 | 395.92 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 54 | 398.35 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 65 | 400.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 68 | 400.15 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 82 | 401.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 84 | 401.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 122 | 402.24 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 129 | 402.62 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 187 | 405.37 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 320 | 410.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 390 | 412.64 | radiation | 1 | 14400 | < th | dose independent | sin | 13 | NA |
| 488 | 415.23 | radiation | 1 | 14400 | > th | dose independent | sin | 13 | NA |
| 511 | 415.87 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 539 | 416.98 | radiation | 1 | 14400 | < th | dose dependent | sin | 15 | NA |
| 579 | 417.78 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 703 | 420.30 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 704 | 420.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 20 |
| 720 | 420.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 806 | 422.69 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 814 | 422.79 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 823 | 422.97 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 883 | 423.59 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 991 | 425.25 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 994 | 425.27 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 19 |