Os11g0453900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dehydrin RAB 16D.
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Os11g0453900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dehydrin RAB 16D.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 267.63 | 0.769 | 4.16 | -2.28 | 1.94 | 2.11 | -2.97 | -1.35 | 0.496 | 5.06 | 20.52 | 5335 | -- | -- |
| 269.51 | 0.765 | 4.22 | -2.37 | 1.93 | 2.44 | -2.92 | -- | 0.483 | 5.04 | 20.5 | 5338 | -- | -- |
| 288.8 | 0.791 | 4.16 | -2.16 | 1.9 | 2.14 | -- | -1.26 | 0.547 | 4.97 | 20.5 | 6414 | -- | -- |
| 285.65 | 0.787 | 4.21 | -2.21 | 1.88 | 2.63 | -- | -- | 0.487 | 4.99 | 19.4 | 6410 | -- | -- |
| 476.44 | 1.02 | 4.16 | -2.1 | -- | 2 | -- | -1.59 | 0.583 | -- | 20.5 | 6331 | -- | -- |
| 367.15 | 0.898 | 4.38 | -4 | 1.9 | -- | -2.84 | -- | -0.253 | 5.18 | -- | -- | -- | -- |
| 387.38 | 0.922 | 4.37 | -4 | 1.88 | -- | -- | -- | -0.24 | 5.09 | -- | -- | -- | -- |
| 471.28 | 1.01 | 4.24 | -2.18 | -- | 2.61 | -- | -- | 0.496 | -- | 19.4 | 6302 | -- | -- |
| 297.25 | 0.803 | 4.06 | -- | 2 | 3.98 | -- | -- | 0.889 | 5.28 | 17.4 | 35489 | -- | -- |
| 572.64 | 1.12 | 4.39 | -3.93 | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
| 808.81 | 1.33 | 4.27 | -- | 1.81 | -- | -- | -- | 0.205 | 5.17 | -- | -- | -- | -- |
| 481.62 | 1.02 | 4.11 | -- | -- | 4.05 | -- | -- | 1.02 | -- | 17.3 | 36317 | -- | -- |
| 980.38 | 1.46 | 4.29 | -- | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 260.30 | temperature | 15 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 2 | 261.92 | temperature | 15 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 3 | 261.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 6 | 262.38 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 9 | 262.72 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 10 | 262.87 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 11 | 263.02 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 12 | 263.10 | temperature | 20 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 17 | 263.55 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 19 | 263.69 | wind | 7 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 22 | 263.73 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 25 | 263.85 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 37 | 264.19 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 57 | 264.71 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 69 | 265.08 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 72 | 265.11 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 76 | 265.16 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 84 | 265.39 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 85 | 265.41 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 113 | 265.81 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 124 | 265.98 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 126 | 265.99 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 134 | 266.13 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 145 | 266.25 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 148 | 266.26 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 192 | 266.69 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 194 | 266.69 | wind | 7 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 201 | 266.74 | wind | 5 | 43200 | < th | dose independent | sin | 19 | NA |
| 214 | 266.85 | wind | 5 | 43200 | > th | dose independent | sin | 19 | NA |
| 236 | 267.00 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 245 | 267.05 | temperature | 25 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 247 | 267.06 | wind | 9 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 249 | 267.07 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 266 | 267.18 | temperature | 20 | 14400 | < th | dose dependent | sin | 10 | NA |
| 279 | 267.25 | wind | 9 | 14400 | > th | dose independent | sin | 6 | NA |
| 287 | 267.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 302 | 267.37 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 304 | 267.39 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 12 |
| 352 | 267.59 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 367 | 267.65 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 405 | 267.91 | temperature | 15 | 14400 | < th | dose dependent | sin | 5 | NA |
| 484 | 268.18 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 516 | 268.29 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 519 | 268.30 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 621 | 268.60 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 12 |
| 651 | 268.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 660 | 268.70 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 677 | 268.73 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 683 | 268.74 | wind | 3 | 43200 | > th | dose dependent | sin | 19 | NA |
| 716 | 268.81 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 829 | 269.09 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 833 | 269.10 | wind | 7 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 846 | 269.13 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 855 | 269.15 | wind | 9 | 14400 | < th | dose independent | sin | 6 | NA |
| 861 | 269.16 | temperature | 20 | 4320 | < th | dose independent | rect. | 11 | 18 |
| 896 | 269.23 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 954 | 269.34 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 1 |