Os11g0452400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0452400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.68 | 0.321 | 8.64 | -1.61 | 0.718 | -1.76 | 0.703 | -2 | 0.267 | 4.94 | 20.06 | 6061 | -- | -- |
| 47.47 | 0.321 | 8.69 | -1.67 | 0.732 | -0.934 | 0.641 | -- | 0.247 | 5.05 | 21.08 | 5980 | -- | -- |
| 47.91 | 0.322 | 8.64 | -1.61 | 0.726 | -1.85 | -- | -2.22 | 0.267 | 5.04 | 19.92 | 6105 | -- | -- |
| 48.63 | 0.325 | 8.7 | -1.63 | 0.726 | -0.907 | -- | -- | 0.238 | 5.05 | 21.45 | 6076 | -- | -- |
| 74.78 | 0.403 | 8.65 | -1.59 | -- | -1.92 | -- | -2.31 | 0.28 | -- | 19.91 | 5611 | -- | -- |
| 54.99 | 0.348 | 8.65 | -1.16 | 0.722 | -- | 0.704 | -- | 0.417 | 4.91 | -- | -- | -- | -- |
| 56.23 | 0.351 | 8.66 | -1.17 | 0.729 | -- | -- | -- | 0.414 | 5.03 | -- | -- | -- | -- |
| 75.66 | 0.405 | 8.7 | -1.6 | -- | -0.938 | -- | -- | 0.261 | -- | 21.3 | 5612 | -- | -- |
| 91.04 | 0.444 | 8.62 | -- | 0.653 | 0.275 | -- | -- | 0.578 | 4.85 | 41.65 | 596 | -- | -- |
| 84.12 | 0.429 | 8.66 | -1.14 | -- | -- | -- | -- | 0.433 | -- | -- | -- | -- | -- |
| 92.05 | 0.449 | 8.63 | -- | 0.708 | -- | -- | -- | 0.544 | 5.09 | -- | -- | -- | -- |
| 106.89 | 0.482 | 8.61 | -- | -- | 0.845 | -- | -- | 0.654 | -- | 47.54 | 297 | -- | -- |
| 118.37 | 0.508 | 8.64 | -- | -- | -- | -- | -- | 0.559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.60 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 2 | 45.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 4 | 45.77 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 5 | 45.77 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 8 | 45.85 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 9 | 45.86 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 11 | 45.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 21 | 45.96 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 25 | 45.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 31 | 46.02 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 66 | 46.15 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 69 | 46.15 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 86 | 46.19 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 112 | 46.24 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 146 | 46.33 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 149 | 46.35 | wind | 3.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 198 | 46.41 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 199 | 46.41 | wind | 7.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 231 | 46.45 | wind | 5.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 316 | 46.53 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 345 | 46.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 355 | 46.57 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 376 | 46.58 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 408 | 46.61 | wind | 1.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 409 | 46.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 410 | 46.61 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 423 | 46.62 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 437 | 46.63 | wind | 7.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 442 | 46.63 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 471 | 46.65 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 485 | 46.66 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 520 | 46.68 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 12 | 11 |
| 530 | 46.69 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 608 | 46.75 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 617 | 46.76 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 621 | 46.76 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 643 | 46.78 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 654 | 46.79 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 661 | 46.79 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 703 | 46.83 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 751 | 46.86 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 769 | 46.88 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 798 | 46.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 802 | 46.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 806 | 46.91 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 814 | 46.91 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 832 | 46.92 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 836 | 46.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 839 | 46.92 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 11 | 13 |
| 846 | 46.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 851 | 46.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 868 | 46.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 873 | 46.94 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 879 | 46.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 880 | 46.94 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 896 | 46.95 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 897 | 46.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 911 | 46.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 939 | 46.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 940 | 46.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 944 | 46.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 950 | 46.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 979 | 46.99 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 990 | 47.00 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |