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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0450300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sulfotransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0226) R2 : 0.023
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.156 (0.0476) R2dN8 : 0.0297 R2N8 : 0.023
σ : 0.426
deviance : 83.21
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.18 0.418 2.89 -0.109 0.00163 -0.32 -0.204 1.75 0.135 0.3 1.048 16 -- --
81.77 0.424 2.87 -0.036 0.00266 -0.165 -0.366 -- 0.155 1.82 1.048 16 -- --
79.34 0.415 2.89 -0.105 0.0124 -0.322 -- 1.8 0.134 22.6 1.094 16 -- --
82.23 0.422 2.87 -0.0299 0.00302 -0.194 -- -- 0.156 1.26 1.006 16 -- --
79.35 0.415 2.89 -0.103 -- -0.322 -- 1.83 0.135 -- 1.09 16 -- --
82.66 0.426 2.87 -0.0161 0.043 -- -0.34 -- 0.152 2.13 -- -- -- --
83.09 0.427 2.87 -0.00634 0.047 -- -- -- 0.154 3.51 -- -- -- --
82.24 0.422 2.87 -0.0301 -- -0.195 -- -- 0.156 -- 1.018 16 -- --
82.26 0.422 2.87 -- 0.00548 -0.189 -- -- 0.159 0.183 1.1 16 -- --
83.21 0.426 2.87 -0.00436 -- -- -- -- 0.155 -- -- -- -- --
83.09 0.426 2.87 -- 0.0468 -- -- -- 0.155 3.51 -- -- -- --
82.26 0.422 2.87 -- -- -0.191 -- -- 0.159 -- 1.034 16 -- --
83.21 0.426 2.87 -- -- -- -- -- 0.156 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.24 temperature 20.0 30 > th dose dependent rect. 2 1
2 62.31 atmosphere 1005.0 30 > th dose dependent rect. 2 1
4 62.44 temperature 20.0 30 > th dose independent rect. 2 1
6 62.46 wind 3.0 30 < th dose dependent rect. 2 1
7 62.48 atmosphere 1005.0 30 > th dose independent rect. 2 1
12 62.59 wind 3.0 30 < th dose independent rect. 2 1
15 62.71 humidity 80.0 30 > th dose independent rect. 2 1
19 62.77 temperature 10.0 30 > th dose independent rect. 2 1
21 62.77 temperature 30.0 30 < th dose independent rect. 2 1
22 62.77 humidity 50.0 30 > th dose independent rect. 2 1
26 62.77 atmosphere 1010.0 30 < th dose independent rect. 2 1
28 62.77 radiation 1.0 30 < th dose independent rect. 2 1
33 62.77 precipitation 0.1 30 < th dose independent rect. 2 1
34 62.77 temperature 10.0 30 > th dose independent rect. 3 23
35 62.77 radiation 1.0 30 < th dose dependent rect. 2 1
40 62.77 precipitation 0.1 30 < th dose dependent rect. 2 1
41 62.78 humidity 50.0 30 > th dose dependent rect. 2 1
48 63.49 atmosphere 1015.0 30 < th dose dependent rect. 2 1
50 63.96 temperature 30.0 30 < th dose dependent rect. 2 1
56 64.84 wind 1.0 30 > th dose independent rect. 2 1
100 68.04 wind 9.0 30 < th dose independent rect. 3 23
102 68.60 wind 9.0 1440 < th dose independent rect. 3 1
103 68.60 temperature 10.0 1440 > th dose independent rect. 3 1
106 68.60 temperature 30.0 1440 < th dose independent rect. 3 1
110 68.60 humidity 50.0 1440 > th dose independent rect. 3 1
119 68.60 atmosphere 995.0 1440 > th dose independent rect. 3 1
120 68.60 radiation 1.0 1440 < th dose independent rect. 3 1
140 68.60 temperature 10.0 1440 > th dose independent rect. 4 23
143 68.60 radiation 1.0 1440 < th dose dependent rect. 3 1
164 70.24 atmosphere 995.0 30 > th dose independent rect. 3 23
169 71.53 precipitation 0.1 30 < th dose independent rect. 3 23
170 71.53 precipitation 0.1 30 < th dose dependent rect. 3 23
200 75.84 humidity 50.0 30 > th dose independent rect. 3 23
204 76.42 temperature 30.0 30 < th dose independent rect. 3 23
211 76.84 temperature 25.0 270 > th dose independent rect. 22 5
212 76.85 temperature 10.0 720 > th dose independent rect. 15 8
213 76.85 temperature 10.0 720 > th dose independent rect. 23 16
214 76.88 temperature 10.0 720 > th dose independent rect. 3 8
215 76.88 atmosphere 995.0 720 > th dose independent rect. 3 8
216 76.88 temperature 10.0 720 > th dose independent rect. 11 16
219 77.02 wind 1.0 10 > th dose independent rect. 23 23
253 77.25 wind 9.0 1440 < th dose independent rect. 23 1
254 77.25 temperature 25.0 30 > th dose independent rect. 22 1
255 77.25 temperature 10.0 1440 > th dose independent rect. 23 1
258 77.25 temperature 30.0 1440 < th dose independent rect. 23 1
262 77.25 humidity 50.0 1440 > th dose independent rect. 23 1
272 77.25 atmosphere 995.0 1440 > th dose independent rect. 23 1
273 77.25 radiation 1.0 1440 < th dose independent rect. 23 1
293 77.25 temperature 10.0 1440 > th dose independent rect. 24 23
296 77.25 radiation 1.0 1440 < th dose dependent rect. 23 1
302 77.28 atmosphere 995.0 720 > th dose independent rect. 11 16
303 77.28 atmosphere 995.0 720 > th dose independent rect. 23 16
304 77.28 temperature 20.0 30 > th dose dependent rect. 22 1
307 77.30 wind 3.0 30 < th dose independent rect. 22 1
308 77.31 atmosphere 995.0 720 > th dose independent rect. 15 8
310 77.32 humidity 80.0 30 > th dose independent rect. 22 1
312 77.32 atmosphere 1005.0 30 > th dose dependent rect. 22 1
318 77.36 humidity 90.0 30 < th dose independent rect. 22 1
321 77.37 wind 5.0 30 < th dose dependent rect. 22 1
326 77.39 atmosphere 1005.0 30 > th dose independent rect. 22 1
332 77.41 precipitation 0.1 30 < th dose independent rect. 22 1
333 77.41 precipitation 0.1 30 < th dose dependent rect. 22 1
336 77.42 temperature 10.0 30 > th dose independent rect. 22 1
338 77.42 temperature 30.0 30 < th dose independent rect. 22 1
339 77.42 humidity 50.0 30 > th dose independent rect. 22 1
342 77.42 atmosphere 995.0 30 > th dose independent rect. 22 1
344 77.42 atmosphere 1010.0 30 < th dose independent rect. 22 1
346 77.42 radiation 1.0 30 < th dose independent rect. 22 1
351 77.42 temperature 10.0 30 > th dose independent rect. 23 23
352 77.42 radiation 1.0 30 < th dose dependent rect. 22 1
357 77.43 wind 1.0 30 > th dose independent rect. 22 1
360 77.44 humidity 50.0 30 > th dose dependent rect. 22 1
361 77.45 wind 9.0 720 < th dose independent rect. 3 8
366 77.49 temperature 25.0 270 > th dose dependent rect. 22 5
371 77.53 temperature 25.0 270 > th dose independent rect. 19 8
375 77.61 atmosphere 1015.0 30 < th dose dependent rect. 22 1
380 77.65 humidity 90.0 30 < th dose dependent rect. 22 1
389 77.75 wind 1.0 30 > th dose dependent rect. 22 1
399 77.89 humidity 50.0 720 > th dose independent rect. 3 8
400 77.89 temperature 30.0 30 < th dose dependent rect. 22 1
477 78.44 precipitation 0.1 720 < th dose independent rect. 15 8
478 78.44 precipitation 0.1 720 < th dose dependent rect. 15 8
488 78.57 precipitation 0.1 720 < th dose independent rect. 23 16
490 78.57 precipitation 0.1 720 < th dose dependent rect. 23 16
491 78.58 wind 9.0 30 < th dose independent rect. 23 23
492 78.58 atmosphere 1015.0 30 < th dose independent rect. 3 23
494 78.60 precipitation 0.1 720 < th dose independent rect. 3 8
496 78.60 precipitation 0.1 720 < th dose dependent rect. 3 8
509 78.73 wind 1.0 30 > th dose independent rect. 3 23
510 78.73 temperature 20.0 30 > th dose dependent rect. 22 5
529 78.81 temperature 25.0 270 > th dose independent sin 11 NA
533 78.87 humidity 90.0 90 < th dose independent rect. 2 1
538 78.89 temperature 30.0 720 < th dose independent rect. 3 8
570 79.09 temperature 25.0 270 < th dose independent sin 11 NA
587 79.20 wind 1.0 10 > th dose independent sin 8 NA
605 79.25 precipitation 0.1 720 < th dose independent rect. 11 16
606 79.25 precipitation 0.1 720 < th dose dependent rect. 11 16
618 79.34 radiation 10.0 30 < th dose independent rect. 3 23
637 79.40 wind 1.0 10 < th dose independent rect. 2 10
646 79.42 radiation 40.0 720 < th dose independent rect. 15 8
660 79.48 temperature 25.0 270 < th dose independent rect. 19 12
685 79.57 atmosphere 995.0 30 > th dose independent rect. 23 23
691 79.60 wind 3.0 30 < th dose dependent rect. 22 5
697 79.62 wind 1.0 720 > th dose independent rect. 15 8
701 79.62 radiation 20.0 30 < th dose dependent rect. 3 23
753 79.71 wind 1.0 10 > th dose independent rect. 23 12
761 79.73 precipitation 0.1 30 < th dose independent rect. 23 23
763 79.73 precipitation 0.1 30 < th dose dependent rect. 23 23
773 79.77 wind 1.0 10 > th dose independent no NA NA
789 79.80 wind 1.0 10 > th dose independent rect. 23 9
812 79.83 atmosphere 1015.0 720 < th dose independent rect. 3 8
823 79.86 wind 9.0 720 < th dose independent rect. 15 8
832 79.88 wind 1.0 10 > th dose independent rect. 12 23
856 79.94 humidity 90.0 10 > th dose independent rect. 24 3
864 79.96 wind 1.0 10 > th dose independent rect. 16 15
890 80.04 wind 1.0 10 > th dose independent rect. 14 17
897 80.06 temperature 25.0 720 < th dose independent rect. 18 6
934 80.12 wind 1.0 10 > th dose independent rect. 21 23
948 80.15 wind 1.0 10 > th dose independent rect. 12 19
980 80.19 wind 3.0 30 < th dose dependent rect. 12 15