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Os11g0448300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MAP kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0325) R2 : 0.738
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.7 (0.083) R2dC : 0.607 R2C : 0.62
β3 : -1.27 (0.0936) R2dE : 0.118 R2E : 0.132
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0235 (0.069) R2dN8 : -3.94e-05 R2N8 : -0.00482
σ : 0.608
deviance : 170.66
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C
peak time of C : 19.9
E
wheather : atmosphere
threshold : 988.7
memory length : 8
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.07
open length of G : 18.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
161.55 0.597 10.8 0.453 2.64 -1.24 -1.3 -0.0817 0.0765 19.8 988.7 7 5.07 18.7
161.52 0.596 10.8 0.455 2.64 -1.23 -1.28 -- 0.0748 19.8 988.3 6 5.08 18.6
166.13 0.605 10.8 0.487 2.64 -1.23 -- 0.193 0.0745 19.8 988.7 7 5.07 18.7
164.59 0.598 10.8 0.45 2.69 -1.28 -- -- 0.0539 19.9 988.2 8 5.08 18.8
195.42 0.651 10.7 0.654 -- -2.54 -- 0.739 0.115 -- 959 297 1.7 9.52
198.33 0.66 10.9 0.483 2.76 -- -1.09 -- -0.106 20.9 -- -- -- --
202.36 0.666 10.9 0.52 2.77 -- -- -- -0.106 20.9 -- -- -- --
195.05 0.65 10.7 0.566 -- -2.61 -- -- 0.0213 -- 962.2 303 1.55 9.6
170.66 0.608 10.8 -- 2.7 -1.27 -- -- 0.0235 19.9 988.7 8 5.07 18.8
640.73 1.18 10.8 0.521 -- -- -- -- -0.124 -- -- -- -- --
209.48 0.677 10.9 -- 2.77 -- -- -- -0.164 21 -- -- -- --
196.63 0.653 10.8 -- -- -2.79 -- -- -0.0767 -- 945.9 380 0.848 9.57
647.9 1.19 10.8 -- -- -- -- -- -0.182 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 164.13 atmosphere 995.0 10 > th dose dependent rect. 5 18
2 164.59 temperature 10.0 10 > th dose dependent rect. 23 6
7 166.18 radiation 1.0 30 < th dose dependent sin 8 NA
10 166.39 temperature 20.0 10 > th dose independent rect. 23 6
11 166.40 radiation 1.0 10 < th dose independent sin 8 NA
13 166.71 radiation 1.0 10 > th dose independent sin 8 NA
18 167.04 atmosphere 1000.0 10 > th dose independent rect. 5 18
20 167.20 atmosphere 1010.0 10 < th dose independent rect. 5 3
28 167.82 temperature 30.0 30 < th dose independent rect. 5 18
32 168.05 radiation 1.0 10 < th dose independent rect. 23 17
35 168.09 radiation 1.0 30 < th dose dependent rect. 23 18
44 168.60 atmosphere 1015.0 10 < th dose dependent rect. 8 21
47 168.84 humidity 50.0 10 > th dose dependent rect. 23 6
50 168.91 radiation 1.0 10 < th dose independent rect. 23 15
58 169.08 radiation 1.0 30 < th dose dependent rect. 23 15
66 169.32 atmosphere 1015.0 10 < th dose independent rect. 23 6
67 169.32 radiation 1.0 10 < th dose independent rect. 23 13
70 169.38 radiation 1.0 10 < th dose independent rect. 23 7
73 169.43 radiation 1.0 10 < th dose independent rect. 23 9
80 169.50 radiation 1.0 10 < th dose dependent rect. 23 7
81 169.52 wind 3.0 270 < th dose dependent rect. 4 2
82 169.63 radiation 1.0 30 < th dose dependent rect. 23 13
86 169.64 humidity 50.0 10 > th dose dependent rect. 10 19
89 169.70 radiation 1.0 30 < th dose dependent rect. 23 9
104 170.04 wind 9.0 10 < th dose independent rect. 5 18
106 170.10 precipitation 0.1 10 < th dose independent rect. 5 18
107 170.10 precipitation 0.1 10 < th dose dependent rect. 5 18
112 170.27 wind 9.0 10 < th dose independent rect. 23 6
113 170.27 temperature 10.0 10 > th dose independent rect. 23 6
114 170.27 temperature 30.0 10 < th dose independent rect. 23 6
115 170.27 humidity 50.0 10 > th dose independent rect. 23 6
118 170.27 atmosphere 995.0 10 > th dose independent rect. 23 6
124 170.27 temperature 10.0 10 > th dose independent rect. 5 18
126 170.27 atmosphere 1015.0 10 < th dose independent rect. 5 18
127 170.28 radiation 30.0 10 < th dose dependent rect. 23 6
129 170.28 humidity 70.0 10 > th dose dependent rect. 11 18
131 170.28 temperature 10.0 10 > th dose dependent rect. 8 21
133 170.30 wind 9.0 10 < th dose dependent rect. 23 6
136 170.33 radiation 1.0 270 > th dose dependent rect. 5 1
159 170.69 temperature 15.0 90 > th dose independent rect. 4 19
165 170.72 temperature 30.0 90 < th dose independent rect. 4 11
195 170.95 temperature 10.0 270 > th dose dependent rect. 22 15
196 171.01 temperature 30.0 10 < th dose independent rect. 5 5
210 171.36 wind 9.0 10 < th dose dependent rect. 5 8
218 171.45 humidity 50.0 10 > th dose dependent rect. 8 21
221 171.53 radiation 1.0 10 > th dose independent rect. 5 3
232 171.54 humidity 70.0 10 > th dose dependent rect. 8 21
236 171.61 precipitation 0.1 30 < th dose independent rect. 23 6
238 171.61 precipitation 0.1 30 < th dose dependent rect. 23 6
247 171.74 temperature 15.0 270 > th dose independent rect. 1 22
248 171.78 temperature 30.0 30 < th dose independent rect. 5 8
269 172.05 wind 9.0 10 < th dose dependent rect. 5 3
270 172.05 wind 7.0 10 < th dose dependent rect. 5 5
279 172.17 temperature 25.0 270 < th dose independent rect. 3 6
284 172.25 temperature 25.0 270 < th dose independent rect. 2 8
295 172.34 temperature 20.0 270 > th dose independent rect. 23 2
303 172.46 wind 5.0 10 < th dose independent rect. 5 3
308 172.52 temperature 30.0 30 < th dose independent rect. 5 14
312 172.60 precipitation 0.1 10 < th dose independent rect. 5 3
314 172.60 precipitation 0.1 10 < th dose dependent rect. 5 3
329 172.81 temperature 10.0 10 > th dose independent rect. 5 3
331 172.81 temperature 30.0 10 < th dose independent rect. 5 3
332 172.81 humidity 50.0 10 > th dose independent rect. 5 3
334 172.81 atmosphere 995.0 10 > th dose independent rect. 5 3
336 172.81 temperature 10.0 10 > th dose independent rect. 8 21
346 172.92 atmosphere 1015.0 10 < th dose independent rect. 8 21
347 172.93 wind 1.0 90 > th dose independent rect. 23 6
363 173.04 radiation 1.0 270 > th dose independent rect. 4 2
388 173.16 temperature 15.0 270 > th dose dependent rect. 23 2
411 173.32 temperature 30.0 270 < th dose dependent rect. 3 6
430 173.46 temperature 10.0 10 > th dose dependent rect. 5 3
441 173.57 wind 9.0 30 < th dose independent rect. 8 21
470 173.73 wind 9.0 10 < th dose dependent rect. 5 18
471 173.75 radiation 40.0 90 < th dose independent rect. 4 19
481 173.84 humidity 50.0 10 > th dose independent rect. 8 21
507 174.04 radiation 40.0 10 < th dose independent rect. 5 3
510 174.06 precipitation 0.1 10 < th dose independent rect. 8 21
512 174.06 precipitation 0.1 10 < th dose dependent rect. 8 21
552 174.38 wind 5.0 10 < th dose independent rect. 5 5
598 174.45 temperature 30.0 90 < th dose dependent rect. 4 9
618 174.62 radiation 40.0 10 < th dose independent rect. 5 18
619 174.65 atmosphere 995.0 10 > th dose independent rect. 8 21
622 174.66 wind 9.0 10 < th dose dependent rect. 5 10
635 174.76 radiation 40.0 30 < th dose independent rect. 5 5
640 174.78 radiation 1.0 30 < th dose dependent rect. 21 23
652 174.85 humidity 50.0 10 > th dose independent rect. 10 19
661 174.95 atmosphere 1005.0 10 > th dose independent rect. 5 3
685 175.16 radiation 40.0 90 < th dose independent rect. 4 9
702 175.27 radiation 40.0 30 < th dose dependent rect. 10 19
710 175.31 humidity 60.0 10 > th dose independent rect. 5 18
714 175.32 radiation 40.0 90 < th dose independent rect. 4 11
733 175.35 humidity 50.0 10 > th dose dependent rect. 5 5
744 175.41 temperature 30.0 30 < th dose dependent rect. 5 5
749 175.43 radiation 20.0 10 < th dose dependent rect. 8 21
753 175.46 atmosphere 1015.0 10 < th dose independent rect. 10 19
798 175.55 precipitation 0.1 10 < th dose independent rect. 5 5
800 175.55 precipitation 0.1 10 < th dose dependent rect. 5 5
803 175.57 wind 9.0 270 < th dose dependent rect. 23 2
810 175.62 wind 5.0 10 < th dose independent rect. 5 8
812 175.64 wind 5.0 270 < th dose independent rect. 23 2
817 175.68 temperature 10.0 10 > th dose independent rect. 5 5
819 175.68 humidity 50.0 10 > th dose independent rect. 5 5
820 175.68 atmosphere 995.0 10 > th dose independent rect. 5 5
822 175.68 temperature 10.0 10 > th dose independent rect. 10 19
833 175.72 temperature 25.0 270 > th dose independent rect. 23 13
837 175.73 wind 3.0 270 < th dose independent rect. 4 2
845 175.75 atmosphere 1015.0 10 < th dose dependent rect. 5 3
852 175.78 wind 3.0 90 < th dose dependent rect. 4 10
858 175.80 humidity 50.0 270 > th dose dependent rect. 23 2
911 175.96 wind 1.0 90 < th dose independent rect. 4 10
924 176.02 humidity 80.0 270 > th dose independent rect. 23 2
940 176.07 temperature 25.0 270 > th dose dependent rect. 8 3
941 176.07 temperature 30.0 90 < th dose dependent rect. 4 13
956 176.10 radiation 10.0 10 < th dose dependent rect. 6 23
963 176.14 temperature 25.0 270 > th dose dependent sin 8 NA
969 176.17 atmosphere 995.0 10 > th dose dependent rect. 5 14
979 176.21 wind 1.0 90 < th dose independent rect. 4 14
995 176.24 atmosphere 1015.0 270 < th dose independent rect. 23 2