Os11g0446000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0446000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.32 | 0.545 | 6.79 | 1.43 | 0.955 | 0.823 | -1.18 | -3.47 | -0.28 | 11.8 | 1.659 | 1022 | -- | -- |
| 150.16 | 0.571 | 6.76 | 1.65 | 0.951 | 0.878 | -0.289 | -- | -0.193 | 11.2 | 0.3278 | 934 | -- | -- |
| 138.37 | 0.548 | 6.79 | 1.47 | 0.897 | 0.737 | -- | -2.65 | -0.246 | 11.7 | 7.555 | 940 | -- | -- |
| 150.36 | 0.571 | 6.76 | 1.64 | 0.945 | 0.85 | -- | -- | -0.188 | 11.2 | 0.345 | 934 | -- | -- |
| 154.36 | 0.582 | 6.75 | 1.72 | -- | 1.13 | -- | -0.982 | -0.0756 | -- | -0.6413 | 1715 | -- | -- |
| 160.97 | 0.595 | 6.75 | 1.73 | 0.762 | -- | -0.549 | -- | -0.0734 | 13.5 | -- | -- | -- | -- |
| 162.16 | 0.596 | 6.75 | 1.71 | 0.761 | -- | -- | -- | -0.0769 | 13.3 | -- | -- | -- | -- |
| 156.56 | 0.585 | 6.76 | 1.69 | -- | 1.13 | -- | -- | -0.0795 | -- | -0.6413 | 1715 | -- | -- |
| 219.65 | 0.69 | 6.81 | -- | 1.04 | 1.12 | -- | -- | -0.389 | 10.6 | -0.03911 | 942 | -- | -- |
| 197.84 | 0.657 | 6.76 | 1.68 | -- | -- | -- | -- | -0.0928 | -- | -- | -- | -- | -- |
| 239.57 | 0.724 | 6.79 | -- | 0.731 | -- | -- | -- | -0.268 | 13.3 | -- | -- | -- | -- |
| 227.03 | 0.702 | 6.81 | -- | -- | 1.18 | -- | -- | -0.323 | -- | -0.9229 | 82 | -- | -- |
| 272.64 | 0.771 | 6.8 | -- | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.51 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 2 | 131.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 4 | 131.98 | humidity | 80 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 5 | 132.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 12 | 133.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 14 | 133.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 24 | 133.80 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 25 | 133.80 | humidity | 70 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 34 | 134.13 | radiation | 40 | 1440 | > th | dose dependent | rect. | 14 | 20 |
| 37 | 134.18 | radiation | 40 | 1440 | > th | dose dependent | sin | 12 | NA |
| 38 | 134.19 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 54 | 134.56 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 74 | 135.06 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 15 |
| 80 | 135.16 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 88 | 135.23 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 12 |
| 89 | 135.24 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 3 |
| 97 | 135.32 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 109 | 135.48 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 16 |
| 129 | 135.74 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 153 | 135.94 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 203 | 136.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 10 |
| 215 | 136.33 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 222 | 136.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 7 |
| 248 | 136.56 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 3 |
| 263 | 136.70 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 301 | 136.97 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 319 | 137.15 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 321 | 137.17 | radiation | 10 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 337 | 137.23 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 338 | 137.23 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 364 | 137.33 | radiation | 20 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 372 | 137.36 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 374 | 137.37 | radiation | 40 | 1440 | < th | dose independent | sin | 12 | NA |
| 402 | 137.50 | radiation | 40 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 407 | 137.53 | temperature | 10 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 411 | 137.54 | temperature | 10 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 413 | 137.54 | radiation | 1 | 720 | > th | dose dependent | sin | 13 | NA |
| 431 | 137.61 | radiation | 1 | 720 | > th | dose dependent | rect. | 14 | 18 |
| 469 | 137.78 | temperature | 10 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 477 | 137.83 | temperature | 10 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 521 | 137.99 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 574 | 138.09 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 664 | 138.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 5 |
| 691 | 138.37 | temperature | 10 | 43200 | > th | dose independent | rect. | 2 | 10 |
| 715 | 138.39 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 729 | 138.46 | temperature | 10 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 730 | 138.46 | temperature | 10 | 43200 | < th | dose dependent | sin | 2 | NA |
| 744 | 138.50 | temperature | 10 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 782 | 138.61 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 819 | 138.66 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 864 | 138.74 | humidity | 50 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 928 | 138.89 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 950 | 138.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |