Os11g0445300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0445300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.21 | 0.683 | 7.64 | 1.43 | 0.805 | -1.52 | 0.328 | -0.898 | -0.481 | 4.3 | 0.2031 | 5936 | -- | -- |
| 211.25 | 0.677 | 7.62 | 1.44 | 0.803 | -1.66 | 0.322 | -- | -0.483 | 4.27 | 0.3139 | 6004 | -- | -- |
| 211.31 | 0.677 | 7.63 | 1.43 | 0.805 | -1.52 | -- | -0.744 | -0.476 | 4.19 | 0.2767 | 6036 | -- | -- |
| 211.52 | 0.677 | 7.63 | 1.44 | 0.804 | -1.66 | -- | -- | -0.485 | 4.21 | 0.3158 | 6004 | -- | -- |
| 246.25 | 0.731 | 7.64 | 1.45 | -- | -1.61 | -- | -0.329 | -0.47 | -- | 0.2501 | 6004 | -- | -- |
| 271.5 | 0.772 | 7.58 | 0.989 | 0.809 | -- | -0.031 | -- | -0.287 | 4.28 | -- | -- | -- | -- |
| 271.5 | 0.772 | 7.58 | 0.989 | 0.809 | -- | -- | -- | -0.287 | 4.29 | -- | -- | -- | -- |
| 246.32 | 0.731 | 7.63 | 1.46 | -- | -1.66 | -- | -- | -0.471 | -- | 0.2724 | 6004 | -- | -- |
| 259.74 | 0.751 | 7.63 | -- | 0.86 | -1.18 | -- | -- | -0.517 | 4.28 | 0.05216 | 6228 | -- | -- |
| 306.77 | 0.818 | 7.58 | 1.02 | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
| 297.28 | 0.807 | 7.6 | -- | 0.828 | -- | -- | -- | -0.397 | 4.27 | -- | -- | -- | -- |
| 291.3 | 0.795 | 7.68 | -- | -- | -1.21 | -- | -- | -0.6 | -- | 0.05401 | 15762 | -- | -- |
| 334.27 | 0.853 | 7.61 | -- | -- | -- | -- | -- | -0.379 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 2 | 213.05 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 4 | 213.72 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 6 | 214.24 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 9 | 214.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 11 | 215.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 12 | 215.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 13 | 215.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 14 | 215.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 15 | 215.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 18 | 215.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 21 | 215.56 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 23 | 215.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 25 | 215.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 26 | 215.87 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 27 | 215.99 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 0 | NA |
| 30 | 216.12 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 36 | 216.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 40 | 216.80 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 45 | 217.16 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 22 |
| 46 | 217.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 49 | 217.24 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 54 | 217.46 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 6 |
| 55 | 217.46 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 57 | 217.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 16 |
| 58 | 217.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 59 | 217.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 65 | 217.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 22 |
| 67 | 217.57 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 68 | 217.57 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 74 | 217.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 77 | 217.76 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 86 | 217.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 19 |
| 92 | 217.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 14 |
| 97 | 217.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 19 |
| 103 | 218.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 19 |
| 141 | 218.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 11 |
| 142 | 218.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 146 | 218.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 148 | 218.40 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 150 | 218.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 18 |
| 157 | 218.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 166 | 218.51 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 10 |
| 172 | 218.53 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 13 |
| 175 | 218.53 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 13 |
| 197 | 218.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 202 | 218.64 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 22 |
| 211 | 218.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 13 |
| 219 | 218.70 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 246 | 218.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 255 | 218.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 273 | 218.90 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 22 | NA |
| 275 | 218.90 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 22 | NA |
| 282 | 218.94 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 22 | NA |
| 290 | 218.95 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 293 | 218.98 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 301 | 219.02 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 328 | 219.13 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 340 | 219.16 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 12 |
| 343 | 219.17 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 347 | 219.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 373 | 219.34 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 408 | 219.54 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 424 | 219.65 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 457 | 219.72 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 465 | 219.76 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 560 | 220.22 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 570 | 220.28 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 16 |
| 597 | 220.39 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 617 | 220.47 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 12 |
| 618 | 220.47 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 627 | 220.51 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 725 | 220.81 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 14 |
| 731 | 220.83 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 734 | 220.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 754 | 220.89 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 775 | 220.96 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 783 | 220.97 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 793 | 220.99 | temperature | 30.0 | 720 | < th | dose independent | sin | 17 | NA |
| 838 | 221.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 887 | 221.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 22 |
| 972 | 221.48 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 19 |