FiT-DB / Search/ Help/ Sample detail

Os11g0441500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.87 (0.0303) R2 : 0.727
β1 : 2.6 (0.111) R2dD : 0.342 R2D : 0.395
β2 : 1.67 (0.079) R2dC : 0.27 R2C : 0.254
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.63 (0.0647) R2dN8 : 0.0762 R2N8 : 0.106
σ : 0.57
deviance : 147.95
__
_____
C
peak time of C : 6.49
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
126.58 0.529 8.89 2.54 1.69 -0.209 -1.67 3.62 -0.673 6.61 48.56 100 -- --
130.22 0.531 8.87 2.46 1.61 -1.35 -1.53 -- -0.665 6.66 58.41 123 -- --
133.53 0.538 8.89 2.54 1.69 -0.225 -- 3.42 -0.654 6.68 48.31 100 -- --
134.43 0.54 8.87 2.45 1.58 -1.49 -- -- -0.673 6.69 58.6 459 -- --
219.74 0.69 8.96 2.77 -- -1.43 -- 2.88 -0.566 -- 37.51 679 -- --
141.3 0.557 8.87 2.62 1.68 -- -1.68 -- -0.637 6.32 -- -- -- --
147.95 0.57 8.87 2.6 1.67 -- -- -- -0.63 6.49 -- -- -- --
194.27 0.649 8.86 2.73 -- -1.65 -- -- -0.436 -- -101.2 731 -- --
173.15 0.613 9.02 -- 1.67 -2.42 -- -- -1.17 6.48 64.6 22399 -- --
293.35 0.8 8.9 2.64 -- -- -- -- -0.595 -- -- -- -- --
326.23 0.845 8.93 -- 1.71 -- -- -- -0.92 6.41 -- -- -- --
315.76 0.828 9.05 -- -- -2.28 -- -- -1.32 -- 66.08 25527 -- --
477.57 1.02 8.96 -- -- -- -- -- -0.888 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 119.07 radiation 20.0 4320 < th dose independent rect. 21 9
2 119.89 radiation 20.0 4320 < th dose independent rect. 23 7
3 120.07 temperature 15.0 270 > th dose independent rect. 22 14
4 121.28 wind 1.0 30 > th dose independent rect. 19 14
8 122.58 humidity 80.0 43200 > th dose independent rect. 10 18
10 122.63 humidity 80.0 43200 < th dose independent rect. 22 21
12 122.70 humidity 80.0 43200 < th dose independent rect. 10 19
15 122.80 humidity 80.0 43200 > th dose independent rect. 11 16
20 122.97 humidity 80.0 43200 < th dose independent rect. 11 16
25 123.06 humidity 80.0 43200 > th dose independent rect. 12 14
34 123.27 humidity 80.0 43200 < th dose independent rect. 24 17
44 123.38 humidity 80.0 43200 > th dose independent rect. 22 22
47 123.51 temperature 15.0 270 > th dose independent rect. 7 20
49 123.58 humidity 80.0 43200 > th dose independent rect. 3 21
54 123.61 precipitation 0.1 1440 < th dose independent rect. 10 3
55 123.61 humidity 70.0 43200 > th dose dependent sin 16 NA
56 123.61 precipitation 0.1 1440 < th dose dependent rect. 10 3
57 123.64 humidity 80.0 43200 < th dose independent rect. 1 15
58 123.67 humidity 90.0 30 < th dose independent rect. 9 10
61 123.68 humidity 70.0 43200 > th dose dependent rect. 12 21
67 123.72 humidity 70.0 43200 > th dose dependent rect. 14 12
73 123.80 humidity 70.0 43200 > th dose dependent rect. 12 17
81 123.86 temperature 10.0 10 > th dose dependent rect. 9 19
108 123.99 temperature 15.0 90 > th dose independent rect. 9 19
113 124.00 humidity 70.0 43200 > th dose dependent rect. 19 23
125 124.05 humidity 80.0 43200 < th dose independent rect. 1 22
127 124.06 temperature 25.0 720 < th dose independent rect. 24 9
129 124.06 humidity 80.0 43200 < th dose independent rect. 3 21
140 124.13 radiation 30.0 270 < th dose independent rect. 10 22
146 124.17 humidity 80.0 43200 > th dose independent sin 17 NA
151 124.17 humidity 70.0 43200 > th dose dependent rect. 17 23
155 124.19 temperature 15.0 270 > th dose independent rect. 6 22
164 124.22 temperature 30.0 270 < th dose independent rect. 7 10
172 124.26 humidity 70.0 43200 > th dose dependent no NA NA
199 124.37 wind 1.0 30 > th dose independent rect. 17 16
227 124.46 humidity 80.0 43200 > th dose independent rect. 1 15
232 124.47 humidity 70.0 43200 > th dose dependent rect. 3 23
255 124.56 wind 1.0 14400 > th dose independent rect. 1 2
259 124.57 humidity 80.0 43200 > th dose independent rect. 2 13
261 124.58 humidity 80.0 43200 < th dose independent sin 3 NA
267 124.61 humidity 80.0 43200 < th dose independent sin 17 NA
305 124.85 atmosphere 1000.0 30 > th dose independent rect. 9 10
313 124.89 humidity 90.0 270 < th dose independent rect. 7 9
314 124.90 radiation 1.0 270 > th dose independent rect. 7 10
341 125.02 humidity 80.0 43200 > th dose independent rect. 3 11
342 125.02 temperature 15.0 270 > th dose independent rect. 8 15
348 125.05 humidity 70.0 90 < th dose independent rect. 11 1
349 125.05 wind 1.0 14400 < th dose independent rect. 1 2
361 125.10 humidity 80.0 43200 > th dose independent no NA NA
363 125.13 temperature 15.0 270 > th dose independent rect. 7 9
368 125.15 humidity 80.0 43200 > th dose independent sin 3 NA
377 125.20 radiation 30.0 4320 < th dose independent rect. 6 1
392 125.29 humidity 80.0 43200 < th dose independent no NA NA
404 125.35 radiation 1.0 4320 < th dose independent rect. 10 1
406 125.35 radiation 1.0 4320 < th dose dependent rect. 10 1
415 125.44 humidity 70.0 43200 > th dose dependent sin 5 NA
418 125.45 temperature 15.0 10 > th dose dependent rect. 11 17
423 125.51 radiation 20.0 90 > th dose independent rect. 11 1
432 125.56 radiation 40.0 270 < th dose dependent rect. 10 22
437 125.58 atmosphere 1000.0 270 > th dose independent rect. 5 23
446 125.62 humidity 90.0 270 < th dose independent rect. 8 4
447 125.62 temperature 25.0 720 < th dose dependent rect. 17 2
468 125.77 wind 9.0 10 < th dose independent rect. 9 10
472 125.79 radiation 1.0 270 > th dose dependent rect. 14 22
481 125.84 radiation 40.0 1440 < th dose independent rect. 16 10
497 125.89 radiation 1.0 270 > th dose dependent rect. 8 4
506 125.94 precipitation 0.1 30 < th dose independent rect. 19 14
508 125.94 precipitation 0.1 30 < th dose dependent rect. 19 14
511 125.95 radiation 10.0 10 > th dose dependent rect. 9 3
513 125.97 humidity 70.0 43200 > th dose dependent rect. 21 2
529 126.01 humidity 90.0 270 < th dose dependent rect. 8 4
532 126.03 temperature 15.0 90 > th dose independent rect. 9 10
535 126.04 temperature 30.0 720 < th dose independent rect. 11 4
539 126.06 radiation 1.0 90 > th dose dependent rect. 9 9
552 126.07 temperature 15.0 1440 > th dose independent rect. 6 15
568 126.14 radiation 1.0 10 > th dose dependent rect. 9 21
569 126.16 radiation 1.0 10 > th dose dependent rect. 9 8
571 126.17 wind 7.0 30 < th dose independent rect. 19 14
572 126.17 radiation 1.0 10 > th dose dependent rect. 9 10
587 126.18 temperature 30.0 270 < th dose independent rect. 14 13
595 126.20 temperature 30.0 720 < th dose independent rect. 22 14
617 126.26 radiation 1.0 14400 > th dose independent rect. 12 1
627 126.29 humidity 80.0 43200 > th dose independent rect. 16 23
636 126.31 atmosphere 995.0 14400 > th dose independent rect. 7 3
639 126.31 atmosphere 1015.0 30 < th dose independent rect. 9 10
640 126.31 temperature 10.0 30 > th dose independent rect. 19 14
641 126.31 temperature 30.0 30 < th dose independent rect. 19 14
642 126.31 humidity 50.0 30 > th dose independent rect. 19 14
644 126.31 atmosphere 995.0 30 > th dose independent rect. 19 14
646 126.31 radiation 1.0 14400 < th dose dependent rect. 7 9
650 126.32 radiation 20.0 4320 < th dose independent rect. 2 4
669 126.39 precipitation 0.1 30 < th dose independent rect. 9 10
670 126.39 precipitation 0.1 30 < th dose dependent rect. 9 10
673 126.40 radiation 40.0 90 > th dose dependent rect. 10 1
675 126.40 radiation 40.0 270 < th dose dependent rect. 1 23
687 126.46 humidity 90.0 30 < th dose independent rect. 11 8
688 126.46 wind 1.0 30 > th dose independent rect. 9 10
691 126.47 temperature 30.0 720 < th dose independent rect. 7 5
716 126.50 wind 9.0 14400 > th dose independent rect. 23 2
729 126.52 wind 1.0 14400 < th dose dependent rect. 2 1
751 126.54 humidity 90.0 10 < th dose dependent rect. 9 10
755 126.55 humidity 80.0 43200 > th dose independent rect. 14 23
769 126.58 radiation 1.0 270 > th dose dependent sin 4 NA
772 126.59 humidity 90.0 4320 > th dose dependent rect. 12 2
780 126.60 temperature 30.0 270 < th dose dependent rect. 16 15
783 126.61 atmosphere 995.0 4320 > th dose independent rect. 23 7
798 126.65 temperature 15.0 1440 > th dose independent rect. 6 17
804 126.66 wind 9.0 14400 > th dose dependent rect. 23 2
809 126.68 radiation 1.0 14400 > th dose independent rect. 7 8
825 126.72 temperature 30.0 720 < th dose dependent rect. 10 13
836 126.74 wind 3.0 4320 > th dose dependent rect. 23 1
840 126.75 temperature 30.0 720 < th dose dependent rect. 11 11
857 126.78 radiation 40.0 30 < th dose independent rect. 19 14
876 126.80 temperature 20.0 270 < th dose dependent rect. 10 21
896 126.82 radiation 1.0 14400 > th dose independent rect. 9 6
897 126.82 radiation 40.0 1440 < th dose independent rect. 16 7
913 126.83 wind 1.0 270 > th dose independent rect. 4 1
924 126.85 temperature 30.0 270 < th dose independent rect. 11 16
926 126.85 humidity 90.0 10 < th dose dependent rect. 9 6
941 126.87 radiation 1.0 14400 < th dose independent rect. 7 8
961 126.88 wind 5.0 4320 < th dose independent rect. 23 1
970 126.89 temperature 15.0 14400 > th dose independent rect. 18 3
972 126.89 temperature 30.0 270 < th dose independent rect. 6 22
986 126.90 radiation 1.0 270 > th dose independent sin 1 NA
999 126.92 wind 1.0 30 > th dose independent rect. 4 5