Os11g0439300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0439300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.57 | 0.331 | 9.4 | -0.932 | 1.38 | -1.03 | -0.113 | -1.63 | -0.103 | 6.03 | 24.32 | 7 | -- | -- |
| 53.68 | 0.344 | 9.43 | -1.15 | 1.42 | -0.872 | -0.258 | -- | -0.182 | 5.99 | 25.7 | 8 | -- | -- |
| 49.51 | 0.328 | 9.39 | -0.927 | 1.39 | -1.04 | -- | -1.68 | -0.0994 | 6.05 | 24.2 | 39 | -- | -- |
| 53.85 | 0.344 | 9.43 | -1.15 | 1.42 | -0.871 | -- | -- | -0.181 | 6 | 25.71 | 4 | -- | -- |
| 147.45 | 0.569 | 9.42 | -0.876 | -- | -0.861 | -- | -1.53 | -0.0406 | -- | 24 | 32 | -- | -- |
| 65.22 | 0.379 | 9.39 | -0.948 | 1.35 | -- | -0.234 | -- | 0.00357 | 6.51 | -- | -- | -- | -- |
| 65.35 | 0.379 | 9.39 | -0.951 | 1.35 | -- | -- | -- | 0.00436 | 6.52 | -- | -- | -- | -- |
| 151.37 | 0.576 | 9.44 | -1.08 | -- | -0.721 | -- | -- | -0.0835 | -- | 24.1 | 6 | -- | -- |
| 85.87 | 0.434 | 9.38 | -- | 1.36 | -0.446 | -- | -- | 0.027 | 6.29 | 25.71 | 4 | -- | -- |
| 159.74 | 0.591 | 9.41 | -0.917 | -- | -- | -- | -- | 0.0322 | -- | -- | -- | -- | -- |
| 89.18 | 0.442 | 9.36 | -- | 1.33 | -- | -- | -- | 0.11 | 6.56 | -- | -- | -- | -- |
| 179.68 | 0.626 | 9.4 | -- | -- | -0.361 | -- | -- | 0.0849 | -- | 24.1 | 6 | -- | -- |
| 181.94 | 0.63 | 9.39 | -- | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 2 | 46.56 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 4 | 46.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 5 | 46.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 9 | 47.01 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 16 |
| 12 | 47.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 25 | 47.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 26 | 47.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 30 | 47.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 44 | 47.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 47 | 47.59 | temperature | 30 | 10 | < th | dose dependent | sin | 14 | NA |
| 66 | 47.88 | temperature | 25 | 90 | < th | dose dependent | sin | 17 | NA |
| 80 | 48.06 | temperature | 20 | 10 | > th | dose dependent | sin | 13 | NA |
| 106 | 48.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 124 | 48.29 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 129 | 48.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 146 | 48.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 199 | 48.63 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 201 | 48.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 13 |
| 380 | 49.35 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 13 |
| 451 | 49.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 470 | 49.68 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 478 | 49.69 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 484 | 49.70 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 486 | 49.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 491 | 49.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 500 | 49.73 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 509 | 49.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 513 | 49.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 523 | 49.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 537 | 49.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 560 | 49.86 | temperature | 25 | 720 | < th | dose independent | sin | 18 | NA |
| 641 | 50.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 694 | 50.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 760 | 50.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 952 | 50.61 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 981 | 50.66 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 14 |
| 987 | 50.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 18 |