Os11g0438000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Short chain alcohol dehydrogenase-like.
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Os11g0438000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Short chain alcohol dehydrogenase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.93 | 0.443 | 7.26 | -2.51 | 1.22 | -0.435 | 0.773 | 0.566 | -0.382 | 5.99 | 10.77 | 10 | -- | -- |
| 90.6 | 0.443 | 7.26 | -2.52 | 1.23 | -0.498 | 0.753 | -- | -0.383 | 5.69 | 10 | 8 | -- | -- |
| 90.35 | 0.443 | 7.26 | -2.51 | 1.23 | -0.435 | -- | 0.513 | -0.382 | 5.98 | 10.85 | 8 | -- | -- |
| 91.83 | 0.446 | 7.26 | -2.52 | 1.23 | -0.411 | -- | -- | -0.385 | 6.06 | 10 | 6 | -- | -- |
| 166.41 | 0.604 | 7.28 | -2.49 | -- | -0.478 | -- | 0.464 | -0.362 | -- | 7.44 | 6 | -- | -- |
| 94.41 | 0.456 | 7.25 | -2.53 | 1.35 | -- | 0.246 | -- | -0.375 | 7.37 | -- | -- | -- | -- |
| 94.57 | 0.455 | 7.25 | -2.53 | 1.35 | -- | -- | -- | -0.375 | 7.39 | -- | -- | -- | -- |
| 167.27 | 0.602 | 7.28 | -2.5 | -- | -0.489 | -- | -- | -0.366 | -- | 6.719 | 2 | -- | -- |
| 258.83 | 0.749 | 7.2 | -- | 1.19 | -0.5 | -- | -- | -0.108 | 5.84 | 10 | 8 | -- | -- |
| 191.22 | 0.646 | 7.28 | -2.5 | -- | -- | -- | -- | -0.353 | -- | -- | -- | -- | -- |
| 262.78 | 0.758 | 7.18 | -- | 1.32 | -- | -- | -- | -0.0941 | 7.52 | -- | -- | -- | -- |
| 330.95 | 0.847 | 7.22 | -- | -- | -0.512 | -- | -- | -0.0849 | -- | 8.48 | 3 | -- | -- |
| 356.66 | 0.881 | 7.22 | -- | -- | -- | -- | -- | -0.0756 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.95 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 6 | 84.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 8 |
| 8 | 85.01 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 12 | 85.34 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 19 | 85.55 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 21 | 85.59 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 25 | 85.77 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 20 | 13 |
| 28 | 85.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 9 |
| 37 | 85.87 | radiation | 10.0 | 10 | < th | dose dependent | sin | 6 | NA |
| 41 | 85.95 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 18 | 15 |
| 45 | 85.99 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 7 |
| 49 | 86.03 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 55 | 86.13 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 11 |
| 62 | 86.13 | humidity | 70.0 | 270 | > th | dose independent | rect. | 15 | 18 |
| 66 | 86.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 70 | 86.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 73 | 86.19 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 6 |
| 74 | 86.20 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 94 | 86.27 | humidity | 70.0 | 270 | > th | dose independent | rect. | 14 | 8 |
| 100 | 86.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 125 | 86.43 | atmosphere | 1005.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 126 | 86.45 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 130 | 86.45 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 143 | 86.49 | radiation | 30.0 | 270 | < th | dose independent | rect. | 17 | 16 |
| 147 | 86.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 16 |
| 148 | 86.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 17 |
| 153 | 86.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 169 | 86.65 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 173 | 86.66 | radiation | 1.0 | 270 | > th | dose independent | sin | 22 | NA |
| 177 | 86.66 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 14 | 8 |
| 183 | 86.69 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 22 | 12 |
| 196 | 86.76 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 198 | 86.76 | humidity | 80.0 | 270 | > th | dose independent | rect. | 21 | 7 |
| 200 | 86.77 | radiation | 1.0 | 30 | > th | dose independent | sin | 4 | NA |
| 201 | 86.77 | radiation | 1.0 | 270 | < th | dose independent | sin | 22 | NA |
| 214 | 86.80 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 222 | 86.83 | radiation | 10.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 257 | 86.92 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 15 |
| 259 | 86.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 16 |
| 277 | 86.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 278 | 86.97 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 15 | 11 |
| 312 | 87.04 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 317 | 87.05 | humidity | 80.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 361 | 87.15 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 2 |
| 368 | 87.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 16 |
| 370 | 87.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 377 | 87.18 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 22 | 9 |
| 380 | 87.18 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 382 | 87.19 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 391 | 87.20 | atmosphere | 1000.0 | 90 | > th | dose independent | sin | 11 | NA |
| 408 | 87.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 416 | 87.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 19 |
| 420 | 87.25 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 9 |
| 422 | 87.25 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 428 | 87.25 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 10 |
| 446 | 87.26 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 22 | 20 |
| 453 | 87.28 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 17 | 13 |
| 460 | 87.29 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 8 |
| 484 | 87.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 486 | 87.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 492 | 87.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 8 |
| 493 | 87.35 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 498 | 87.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 8 |
| 503 | 87.36 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 19 | 3 |
| 513 | 87.37 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 516 | 87.38 | radiation | 1.0 | 30 | < th | dose independent | sin | 5 | NA |
| 531 | 87.40 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 8 |
| 536 | 87.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 6 |
| 558 | 87.42 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 559 | 87.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 562 | 87.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 8 |
| 563 | 87.43 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 10 |
| 570 | 87.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 16 |
| 585 | 87.45 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 14 | 8 |
| 636 | 87.50 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 16 |
| 650 | 87.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 655 | 87.52 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 22 | 19 |
| 677 | 87.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 698 | 87.57 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 17 |
| 700 | 87.57 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 707 | 87.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 16 | 6 |
| 725 | 87.60 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 727 | 87.60 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 10 |
| 739 | 87.61 | atmosphere | 995.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 748 | 87.61 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 803 | 87.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 820 | 87.68 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 833 | 87.68 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 846 | 87.69 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 881 | 87.72 | atmosphere | 1005.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 904 | 87.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 908 | 87.74 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 9 |
| 924 | 87.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 10 |
| 927 | 87.76 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 15 |
| 935 | 87.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 947 | 87.77 | radiation | 1.0 | 270 | < th | dose dependent | sin | 23 | NA |
| 957 | 87.77 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 991 | 87.80 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 5 | 22 |