Os11g0437800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os11g0437800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 173.42 | 0.619 | 2.75 | 0.0223 | 0.13 | -0.283 | 0.671 | -1.11 | 0.0101 | 2.74 | 10.3 | 1377 | -- | -- |
| 175.27 | 0.617 | 2.73 | 0.159 | 0.101 | -0.267 | 0.619 | -- | 0.0579 | 2.69 | 11.21 | 1462 | -- | -- |
| 174.83 | 0.616 | 2.74 | 0.0175 | 0.115 | -0.275 | -- | -0.977 | 0.0204 | 2.74 | 10.31 | 1455 | -- | -- |
| 176.33 | 0.618 | 2.73 | 0.155 | 0.104 | -0.267 | -- | -- | 0.0553 | 2.77 | 11.21 | 1463 | -- | -- |
| 174.48 | 0.615 | 2.75 | 0.0483 | -- | -0.312 | -- | -0.989 | 0.0151 | -- | 10.05 | 1702 | -- | -- |
| 177.92 | 0.625 | 2.74 | 0.0926 | 0.1 | -- | 0.518 | -- | -0.0109 | 3.69 | -- | -- | -- | -- |
| 178.63 | 0.626 | 2.74 | 0.0847 | 0.114 | -- | -- | -- | -0.014 | 5.08 | -- | -- | -- | -- |
| 176.25 | 0.618 | 2.72 | 0.166 | -- | -0.338 | -- | -- | 0.0635 | -- | 10.06 | 1724 | -- | -- |
| 176.14 | 0.618 | 2.74 | -- | 0.103 | -0.328 | -- | -- | 0.0445 | 2.55 | 7.04 | 1356 | -- | -- |
| 179.32 | 0.626 | 2.74 | 0.0888 | -- | -- | -- | -- | -0.0111 | -- | -- | -- | -- | -- |
| 178.82 | 0.626 | 2.74 | -- | 0.116 | -- | -- | -- | -0.0235 | 5.05 | -- | -- | -- | -- |
| 176.5 | 0.619 | 2.73 | -- | -- | -0.35 | -- | -- | 0.0253 | -- | 7.53 | 1762 | -- | -- |
| 179.53 | 0.625 | 2.74 | -- | -- | -- | -- | -- | -0.021 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.47 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 8 | 161.47 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 17 | 162.34 | humidity | 80.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 20 | 163.38 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 29 | 165.52 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 38 | 167.52 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 46 | 167.52 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 80 | 168.36 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 84 | 168.48 | radiation | 20.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 91 | 168.64 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 13 |
| 96 | 168.64 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 102 | 168.67 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 108 | 168.67 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 116 | 168.74 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 117 | 168.76 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 124 | 168.87 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 128 | 168.90 | wind | 9.0 | 30 | > th | dose dependent | rect. | 15 | 11 |
| 221 | 169.47 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 231 | 169.47 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 242 | 169.51 | radiation | 1.0 | 30 | < th | dose independent | rect. | 6 | 2 |
| 247 | 169.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 253 | 169.67 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 15 |
| 263 | 169.84 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 276 | 170.03 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 5 |
| 282 | 170.08 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 336 | 170.27 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 7 |
| 345 | 170.30 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 9 |
| 351 | 170.31 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 7 |
| 357 | 170.35 | wind | 9.0 | 30 | > th | dose dependent | sin | 15 | NA |
| 393 | 170.46 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 414 | 170.50 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 418 | 170.55 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 22 |
| 437 | 170.64 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 440 | 170.66 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 443 | 170.67 | wind | 9.0 | 30 | > th | dose independent | rect. | 15 | 11 |
| 566 | 170.89 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 5 |
| 624 | 171.01 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 630 | 171.03 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 646 | 171.12 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 651 | 171.15 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 660 | 171.17 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 677 | 171.17 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 794 | 171.66 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 809 | 171.67 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 9 |
| 865 | 171.85 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 902 | 171.85 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 952 | 171.94 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 955 | 171.94 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 958 | 171.95 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 4 |