Os11g0435400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0435400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 262.46 | 0.761 | 2.67 | 1.44 | 0.358 | -68.5 | 0.0293 | 178 | 1.31 | 4.39 | 45.93 | 147 | -- | -- |
| 284.66 | 0.792 | 3.08 | 0.539 | 0.3 | -0.179 | -0.445 | -- | 1.31 | 4.57 | 45.39 | 175 | -- | -- |
| 259.57 | 0.75 | 2.58 | 1.77 | 0.313 | -68 | -- | 177 | 1.32 | 4.59 | 43.9 | 148 | -- | -- |
| 275.78 | 0.773 | 3.08 | 0.252 | 0.265 | 1.88 | -- | -- | 1.19 | 5.71 | 45.96 | 136 | -- | -- |
| 265.21 | 0.758 | 2.44 | 2.11 | -- | -70.4 | -- | 183 | 1.32 | -- | 43.14 | 115 | -- | -- |
| 284.75 | 0.791 | 3.08 | 0.532 | 0.302 | -- | -0.429 | -- | 1.31 | 4.55 | -- | -- | -- | -- |
| 285.24 | 0.791 | 3.08 | 0.534 | 0.299 | -- | -- | -- | 1.31 | 4.43 | -- | -- | -- | -- |
| 276.77 | 0.775 | 3.06 | 0.506 | -- | 2.66 | -- | -- | 1.33 | -- | 45.91 | 146 | -- | -- |
| 276.53 | 0.774 | 3.08 | -- | 0.299 | 2.69 | -- | -- | 1.23 | 5.51 | 45.21 | 158 | -- | -- |
| 290.04 | 0.796 | 3.08 | 0.546 | -- | -- | -- | -- | 1.32 | -- | -- | -- | -- | -- |
| 292.77 | 0.8 | 3.09 | -- | 0.309 | -- | -- | -- | 1.25 | 4.39 | -- | -- | -- | -- |
| 281.35 | 0.781 | 3.09 | -- | -- | 3.22 | -- | -- | 1.27 | -- | 45.97 | 146 | -- | -- |
| 297.91 | 0.806 | 3.09 | -- | -- | -- | -- | -- | 1.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.75 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 1 |
| 3 | 250.75 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 5 | 256.88 | humidity | 50 | 90 | < th | dose independent | rect. | 15 | 3 |
| 22 | 256.89 | humidity | 50 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 95 | 257.19 | wind | 1 | 10 | < th | dose independent | rect. | 14 | 2 |
| 97 | 257.19 | wind | 1 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 120 | 257.26 | humidity | 50 | 10 | < th | dose independent | rect. | 15 | 1 |
| 217 | 258.32 | humidity | 50 | 90 | < th | dose dependent | sin | 12 | NA |
| 218 | 259.26 | humidity | 50 | 90 | < th | dose independent | sin | 12 | NA |
| 229 | 262.14 | temperature | 30 | 30 | > th | dose independent | rect. | 14 | 4 |
| 232 | 262.26 | humidity | 50 | 90 | > th | dose independent | sin | 12 | NA |
| 265 | 262.54 | temperature | 30 | 30 | > th | dose independent | sin | 14 | NA |
| 267 | 262.81 | wind | 1 | 90 | < th | dose independent | rect. | 6 | 1 |
| 287 | 264.09 | wind | 1 | 90 | < th | dose independent | rect. | 6 | 3 |
| 291 | 264.27 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 293 | 264.41 | humidity | 80 | 10 | > th | dose independent | rect. | 7 | 2 |
| 332 | 265.10 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 355 | 265.38 | temperature | 30 | 30 | > th | dose independent | rect. | 12 | 6 |
| 362 | 265.68 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 379 | 265.85 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 472 | 267.25 | temperature | 30 | 30 | < th | dose independent | sin | 14 | NA |
| 476 | 267.33 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 23 | 9 |
| 482 | 267.57 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 3 |
| 500 | 267.80 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 15 |
| 502 | 267.90 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 512 | 268.07 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 8 |
| 599 | 269.97 | humidity | 90 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 646 | 270.20 | humidity | 90 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 669 | 270.53 | humidity | 90 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 676 | 270.59 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 688 | 270.78 | humidity | 70 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 697 | 270.93 | humidity | 90 | 90 | > th | dose independent | rect. | 6 | 14 |
| 704 | 271.01 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 7 | 1 |
| 708 | 271.13 | humidity | 50 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 715 | 271.20 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 730 | 271.35 | humidity | 90 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 734 | 271.39 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 741 | 271.45 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 761 | 271.47 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 763 | 271.48 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 772 | 271.50 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 813 | 271.60 | wind | 3 | 30 | < th | dose independent | rect. | 6 | 11 |
| 826 | 271.64 | humidity | 90 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 843 | 271.67 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 846 | 271.68 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 858 | 271.69 | humidity | 80 | 14400 | > th | dose dependent | sin | 17 | NA |
| 887 | 271.75 | humidity | 80 | 14400 | > th | dose independent | sin | 19 | NA |
| 947 | 271.82 | humidity | 70 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 966 | 271.84 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 972 | 271.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 985 | 271.88 | humidity | 70 | 14400 | > th | dose independent | sin | 13 | NA |