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Os11g0434800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0258) R2 : 0.896
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.23 (0.1) R2dC : 0.26 R2C : 0.631
β3 : 3.11 (0.144) R2dE : 0.247 R2E : 0.629
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.342 (0.0547) R2dN8 : 0.0118 R2N8 : 0.012
σ : 0.484
deviance : 107.97
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_____
C
peak time of C : 16.3
E
wheather : temperature
threshold : -5.486
memory length : 172
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.52
open length of G : 21

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
105.82 0.483 11.7 0.203 2.35 2.65 -2.26 2.95 0.361 16.5 3.927 103 6.2 20.7
108.34 0.485 11.7 0.145 2.28 2.67 -0.947 -- 0.376 16.4 -2.046 128 6.06 20.5
108.39 0.485 11.7 0.0456 2.19 3.1 -- 0.206 0.343 16.4 -2.392 176 5.58 20.8
108.04 0.484 11.7 0.069 2.24 3.03 -- -- 0.343 16.3 -5.262 173 5.55 20.9
167.1 0.602 11.7 -0.118 -- 4.9 -- 1.6 0.286 -- -1.697 298 4.85 19.5
211.76 0.682 11.7 0.3 3.9 -- -0.128 -- 0.522 16.6 -- -- -- --
211.81 0.682 11.7 0.3 3.9 -- -- -- 0.521 16.6 -- -- -- --
144.74 0.56 11.7 0.122 -- 4.46 -- -- 0.268 -- -4.314 322 5.72 17
107.97 0.484 11.7 -- 2.23 3.11 -- -- 0.342 16.3 -5.486 172 5.52 21
1020.87 1.49 11.7 0.15 -- -- -- -- 0.419 -- -- -- -- --
214.17 0.685 11.7 -- 3.89 -- -- -- 0.488 16.6 -- -- -- --
142.57 0.556 11.7 -- -- 4.41 -- -- 0.369 -- -5.62 313 5.68 17
1021.47 1.49 11.7 -- -- -- -- -- 0.403 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 116.20 temperature 10.0 90 > th dose dependent rect. 6 21
4 122.11 temperature 10.0 10 > th dose dependent rect. 7 20
6 122.39 temperature 10.0 270 > th dose dependent rect. 6 18
12 126.33 wind 7.0 90 < th dose dependent rect. 3 3
18 128.14 precipitation 0.1 90 < th dose independent rect. 3 3
19 128.14 precipitation 0.1 90 < th dose dependent rect. 3 3
21 128.66 wind 5.0 90 < th dose independent rect. 3 3
23 128.98 precipitation 0.1 90 < th dose independent rect. 6 21
24 128.98 precipitation 0.1 90 < th dose dependent rect. 6 21
27 129.03 precipitation 0.1 270 < th dose independent rect. 1 4
28 129.03 precipitation 0.1 270 < th dose dependent rect. 1 4
30 129.16 temperature 10.0 90 > th dose independent rect. 3 3
32 129.16 temperature 30.0 90 < th dose independent rect. 3 3
33 129.16 humidity 50.0 90 > th dose independent rect. 3 3
36 129.16 atmosphere 995.0 90 > th dose independent rect. 3 3
37 129.16 atmosphere 1010.0 90 < th dose independent rect. 3 3
39 129.16 radiation 20.0 90 < th dose independent rect. 3 3
42 129.16 temperature 10.0 90 > th dose independent rect. 6 21
43 129.24 wind 9.0 90 < th dose independent rect. 6 21
46 129.45 temperature 20.0 270 > th dose independent rect. 6 19
49 130.07 wind 7.0 270 < th dose independent rect. 1 4
51 130.19 wind 9.0 270 < th dose dependent rect. 1 4
54 130.39 radiation 1.0 270 < th dose independent rect. 1 4
56 130.39 radiation 10.0 270 < th dose dependent rect. 1 4
59 130.42 radiation 40.0 90 < th dose dependent rect. 3 3
62 130.43 temperature 10.0 270 > th dose independent rect. 1 4
64 130.43 temperature 25.0 270 < th dose independent rect. 1 4
66 130.43 humidity 50.0 270 > th dose independent rect. 1 4
69 130.43 atmosphere 995.0 270 > th dose independent rect. 1 4
70 130.43 atmosphere 1010.0 270 < th dose independent rect. 1 4
76 130.46 humidity 50.0 90 > th dose dependent rect. 3 3
97 131.89 atmosphere 1015.0 90 < th dose independent rect. 6 21
125 133.01 humidity 50.0 270 > th dose dependent rect. 1 4
128 133.16 precipitation 0.1 10 < th dose independent rect. 7 20
129 133.16 precipitation 0.1 10 < th dose dependent rect. 7 20
139 133.70 temperature 10.0 90 > th dose dependent rect. 3 3
142 133.83 precipitation 0.1 10 < th dose independent rect. 3 4
143 133.83 precipitation 0.1 10 < th dose dependent rect. 3 4
154 134.24 wind 5.0 10 < th dose independent rect. 3 4
178 134.78 temperature 10.0 270 > th dose independent rect. 4 22
179 134.78 radiation 1.0 270 < th dose dependent rect. 2 2
188 135.02 wind 9.0 270 < th dose independent rect. 4 22
190 135.09 temperature 10.0 10 > th dose independent rect. 3 4
192 135.09 temperature 30.0 10 < th dose independent rect. 3 4
193 135.09 humidity 50.0 10 > th dose independent rect. 3 4
196 135.09 atmosphere 995.0 10 > th dose independent rect. 3 4
198 135.09 radiation 20.0 10 < th dose independent rect. 3 4
201 135.09 temperature 10.0 10 > th dose independent rect. 7 20
202 135.31 precipitation 0.1 270 < th dose independent rect. 4 22
203 135.31 precipitation 0.1 270 < th dose dependent rect. 4 22
211 135.50 wind 9.0 10 < th dose independent rect. 7 20
217 135.82 humidity 50.0 10 > th dose dependent rect. 3 4
239 136.09 atmosphere 1015.0 10 < th dose independent rect. 7 20
240 136.10 radiation 1.0 270 < th dose dependent rect. 1 17
245 136.25 wind 1.0 270 > th dose independent rect. 1 3
340 137.59 precipitation 0.1 270 < th dose independent rect. 15 10
341 137.59 precipitation 0.1 270 < th dose dependent rect. 15 10
360 137.82 temperature 10.0 270 > th dose dependent rect. 17 8
369 138.07 radiation 1.0 270 < th dose dependent rect. 1 8
373 138.12 atmosphere 995.0 90 > th dose dependent rect. 3 3
456 138.79 atmosphere 995.0 90 > th dose independent rect. 6 21
487 139.29 wind 9.0 1440 < th dose independent rect. 3 5
488 139.29 temperature 10.0 1440 > th dose independent rect. 3 5
491 139.29 temperature 30.0 1440 < th dose independent rect. 3 5
495 139.29 humidity 50.0 1440 > th dose independent rect. 3 5
500 139.29 atmosphere 995.0 1440 > th dose independent rect. 3 5
501 139.29 temperature 10.0 1440 > th dose independent rect. 8 19
506 139.32 temperature 10.0 270 > th dose dependent rect. 1 4
517 139.66 temperature 10.0 10 > th dose dependent rect. 3 4
523 139.74 precipitation 0.1 270 < th dose independent rect. 1 14
525 139.74 precipitation 0.1 270 < th dose dependent rect. 1 14
575 140.70 atmosphere 995.0 270 > th dose independent rect. 1 14
580 140.82 temperature 30.0 90 < th dose dependent rect. 3 3
585 141.03 temperature 25.0 90 < th dose independent rect. 4 1
590 141.09 radiation 1.0 270 < th dose independent rect. 1 17
600 141.27 wind 9.0 270 < th dose independent rect. 15 10
609 141.42 temperature 10.0 270 > th dose independent rect. 15 10
610 141.42 temperature 10.0 270 > th dose independent rect. 1 14
611 141.42 atmosphere 1015.0 270 < th dose independent rect. 1 14
612 141.47 atmosphere 1015.0 90 < th dose dependent rect. 3 3
624 141.79 radiation 40.0 270 < th dose independent rect. 15 10
640 141.82 atmosphere 1015.0 1440 < th dose independent rect. 4 4
663 141.96 wind 9.0 270 < th dose independent rect. 1 14
694 142.34 radiation 1.0 270 < th dose independent rect. 1 8
732 142.68 atmosphere 995.0 10 > th dose independent rect. 7 20
736 142.74 wind 1.0 270 > th dose independent rect. 4 21
798 143.29 temperature 30.0 270 < th dose dependent rect. 1 4
894 144.18 temperature 15.0 270 > th dose dependent rect. 21 3
908 144.40 atmosphere 995.0 270 > th dose dependent rect. 1 4
945 144.65 atmosphere 995.0 10 > th dose dependent rect. 3 4
951 144.77 radiation 40.0 1440 < th dose independent rect. 3 5