Os11g0431700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine carboxypeptidase.
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Os11g0431700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine carboxypeptidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.27 | 0.434 | 2.83 | -0.0696 | 0.184 | -0.296 | 0.0595 | -0.105 | 0.00468 | 10.2 | 1.1 | 9 | -- | -- |
| 85.18 | 0.43 | 2.83 | -0.0836 | 0.179 | -0.324 | 0.0476 | -- | -0.000397 | 10.3 | 1.129 | 15 | -- | -- |
| 85.19 | 0.43 | 2.83 | -0.0835 | 0.178 | -0.326 | -- | 0.0499 | -8e-04 | 10.3 | 1.132 | 15 | -- | -- |
| 85.19 | 0.43 | 2.83 | -0.0819 | 0.179 | -0.323 | -- | -- | -0.000449 | 10.3 | 1.138 | 15 | -- | -- |
| 87.13 | 0.435 | 2.84 | -0.0891 | -- | -0.323 | -- | 0.0848 | -0.00111 | -- | 1.183 | 15 | -- | -- |
| 87.83 | 0.439 | 2.83 | -0.0413 | 0.207 | -- | 0.0644 | -- | -0.00593 | 8.32 | -- | -- | -- | -- |
| 87.84 | 0.439 | 2.83 | -0.0393 | 0.207 | -- | -- | -- | -0.00593 | 8.34 | -- | -- | -- | -- |
| 87.14 | 0.435 | 2.84 | -0.0838 | -- | -0.317 | -- | -- | -0.000974 | -- | 1.164 | 15 | -- | -- |
| 85.37 | 0.43 | 2.83 | -- | 0.179 | -0.312 | -- | -- | 0.00827 | 10.3 | 1.145 | 15 | -- | -- |
| 90.22 | 0.444 | 2.84 | -0.0381 | -- | -- | -- | -- | -0.00372 | -- | -- | -- | -- | -- |
| 87.89 | 0.439 | 2.83 | -- | 0.207 | -- | -- | -- | -0.00155 | 8.35 | -- | -- | -- | -- |
| 87.32 | 0.435 | 2.84 | -- | -- | -0.307 | -- | -- | 0.00809 | -- | 1.18 | 15 | -- | -- |
| 90.26 | 0.443 | 2.84 | -- | -- | -- | -- | -- | 0.000502 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.92 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 2 | 82.01 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 3 | 82.18 | humidity | 70 | 270 | < th | dose independent | rect. | 8 | 1 |
| 4 | 82.18 | humidity | 80 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 5 | 82.19 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 6 | 82.19 | radiation | 40 | 30 | > th | dose dependent | rect. | 14 | 21 |
| 7 | 82.20 | humidity | 60 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 20 | 82.20 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 42 | 82.23 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 81 | 82.24 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 3 |
| 107 | 82.27 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 168 | 82.28 | humidity | 60 | 10 | < th | dose independent | rect. | 17 | 17 |
| 170 | 82.28 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 289 | 82.30 | humidity | 60 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 313 | 82.31 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 6 |
| 361 | 82.33 | humidity | 60 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 436 | 82.53 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 519 | 82.70 | humidity | 80 | 30 | > th | dose independent | rect. | 11 | 1 |
| 561 | 82.91 | humidity | 80 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 568 | 82.93 | humidity | 80 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 644 | 83.11 | wind | 1 | 10 | < th | dose independent | sin | 22 | NA |
| 645 | 83.12 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 656 | 83.14 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 684 | 83.19 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 713 | 83.24 | humidity | 80 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 724 | 83.32 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 2 |
| 975 | 83.49 | humidity | 70 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 988 | 83.52 | wind | 1 | 10 | > th | dose independent | sin | 23 | NA |