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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0431300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.09 (0.00998) R2 : 0.0101
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0454 (0.021) R2dN8 : 0.0131 R2N8 : 0.0101
σ : 0.188
deviance : 16.23
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.23 0.177 3.08 0.129 0.263 0.157 -0.765 -0.912 -0.0208 12.2 0.7111 252 -- --
14.86 0.18 3.08 0.0736 0.24 0.135 0.199 -- -0.036 12.5 0.05996 314 -- --
14.56 0.178 3.08 0.101 0.266 0.155 -- -0.265 -0.0253 12.1 0.03904 254 -- --
14.95 0.18 3.08 0.0906 0.262 0.152 -- -- -0.0289 12.1 0.04272 242 -- --
15.02 0.181 3.08 0.114 -- 0.169 -- -0.207 -0.0228 -- 0.03436 1039 -- --
15.09 0.182 3.08 0.0687 0.129 -- 0.049 -- -0.0378 9.86 -- -- -- --
15.1 0.182 3.08 0.0703 0.13 -- -- -- -0.0379 9.69 -- -- -- --
14.98 0.18 3.08 0.104 -- 0.233 -- -- -0.0228 -- 0.05922 1079 -- --
15.14 0.181 3.08 -- 0.255 0.148 -- -- -0.0328 12 0.06 228 -- --
16.1 0.188 3.09 0.0692 -- -- -- -- -0.0377 -- -- -- -- --
15.23 0.183 3.09 -- 0.13 -- -- -- -0.0457 9.65 -- -- -- --
15.18 0.182 3.09 -- -- -0.107 -- -- -0.0451 -- 13.44 114 -- --
16.23 0.188 3.09 -- -- -- -- -- -0.0454 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.02 radiation 1.0 90 < th dose dependent rect. 6 7
2 13.07 temperature 20.0 90 < th dose independent rect. 6 1
4 13.21 radiation 1.0 90 < th dose dependent rect. 6 5
6 13.23 temperature 20.0 90 < th dose dependent rect. 6 1
15 13.28 radiation 1.0 90 < th dose dependent rect. 6 1
41 13.49 radiation 1.0 90 < th dose dependent rect. 6 9
42 13.50 atmosphere 1000.0 10 > th dose independent rect. 8 23
47 13.58 radiation 1.0 90 < th dose independent rect. 6 7
48 13.58 humidity 90.0 90 > th dose dependent rect. 7 3
75 13.76 radiation 1.0 90 < th dose independent rect. 6 5
76 13.76 radiation 1.0 90 < th dose independent rect. 6 9
85 13.79 radiation 1.0 90 < th dose independent rect. 6 1
115 13.85 humidity 90.0 10 > th dose independent rect. 7 3
136 13.91 wind 5.0 10 < th dose independent rect. 7 1
153 13.92 wind 9.0 720 < th dose dependent rect. 20 1
157 13.93 atmosphere 1000.0 90 > th dose independent rect. 8 11
158 13.93 atmosphere 1000.0 10 > th dose independent rect. 12 21
165 13.94 wind 5.0 720 < th dose independent rect. 20 1
173 13.95 atmosphere 1000.0 90 > th dose independent rect. 11 22
174 13.95 atmosphere 1015.0 10 < th dose dependent rect. 7 1
178 13.96 atmosphere 1000.0 10 < th dose independent rect. 7 20
187 13.97 radiation 1.0 90 > th dose independent rect. 8 22
190 13.98 atmosphere 1005.0 90 < th dose independent rect. 6 1
191 13.98 atmosphere 1005.0 10 < th dose independent rect. 7 1
210 13.99 wind 5.0 90 < th dose independent rect. 19 13
227 14.01 wind 1.0 30 > th dose independent rect. 7 1
230 14.01 atmosphere 1000.0 90 > th dose independent rect. 3 23
231 14.01 atmosphere 995.0 720 > th dose independent rect. 21 23
240 14.02 humidity 50.0 30 > th dose dependent rect. 7 1
245 14.03 temperature 30.0 4320 < th dose independent rect. 3 6
249 14.03 wind 9.0 30 < th dose dependent rect. 7 1
250 14.03 wind 5.0 14400 < th dose dependent rect. 10 2
259 14.05 temperature 10.0 10 > th dose independent rect. 7 1
261 14.05 temperature 30.0 10 < th dose independent rect. 7 1
262 14.05 humidity 50.0 10 > th dose independent rect. 7 1
264 14.05 atmosphere 995.0 10 > th dose independent rect. 7 1
265 14.05 atmosphere 1015.0 10 < th dose independent rect. 7 1
266 14.05 radiation 1.0 10 > th dose independent rect. 7 1
267 14.05 precipitation 0.1 10 < th dose independent rect. 7 1
272 14.05 temperature 10.0 10 > th dose independent rect. 8 23
276 14.05 precipitation 0.1 10 < th dose dependent rect. 7 1
283 14.06 wind 9.0 1440 < th dose independent rect. 8 1
288 14.06 temperature 10.0 1440 > th dose independent rect. 8 1
296 14.06 humidity 50.0 1440 > th dose independent rect. 8 1
299 14.06 atmosphere 995.0 1440 > th dose independent rect. 8 1
305 14.06 atmosphere 1015.0 1440 < th dose independent rect. 8 1
307 14.06 atmosphere 1000.0 90 > th dose independent rect. 16 14
308 14.06 atmosphere 1000.0 30 > th dose independent rect. 15 18
313 14.06 temperature 10.0 1440 > th dose independent rect. 9 23
321 14.07 radiation 40.0 30 < th dose independent rect. 7 1
325 14.07 temperature 30.0 4320 < th dose independent rect. 20 13
329 14.07 wind 9.0 30 < th dose independent rect. 8 23
331 14.07 precipitation 0.1 10 < th dose independent rect. 8 23
337 14.07 wind 9.0 90 < th dose dependent rect. 19 13
338 14.07 precipitation 0.1 10 < th dose dependent rect. 8 23
348 14.08 wind 1.0 90 > th dose independent rect. 8 11
363 14.08 radiation 1.0 270 < th dose dependent rect. 3 11
367 14.09 atmosphere 1000.0 90 > th dose independent rect. 19 13
373 14.10 atmosphere 995.0 720 > th dose independent rect. 13 7
374 14.10 wind 9.0 90 < th dose independent rect. 8 11
387 14.11 humidity 90.0 90 < th dose independent rect. 2 2
388 14.11 precipitation 0.1 90 < th dose independent rect. 19 13
389 14.11 atmosphere 995.0 720 > th dose independent rect. 8 17
394 14.11 precipitation 0.1 90 < th dose dependent rect. 19 13
395 14.12 wind 3.0 14400 > th dose independent rect. 11 1
398 14.12 atmosphere 1000.0 720 > th dose independent rect. 3 8
399 14.12 precipitation 0.1 90 < th dose independent rect. 8 11
412 14.12 precipitation 0.1 90 < th dose dependent rect. 8 11
413 14.13 wind 3.0 14400 < th dose independent rect. 10 2
417 14.13 temperature 10.0 90 > th dose independent rect. 8 11
418 14.13 atmosphere 1015.0 90 < th dose independent rect. 8 11
420 14.13 temperature 10.0 90 > th dose independent rect. 19 13
421 14.13 temperature 30.0 90 < th dose independent rect. 19 13
422 14.13 humidity 50.0 90 > th dose independent rect. 19 13
425 14.13 atmosphere 1000.0 10 > th dose independent rect. 16 15
430 14.13 radiation 1.0 270 < th dose dependent sin 3 NA
436 14.13 humidity 80.0 90 < th dose dependent rect. 2 3
444 14.13 radiation 1.0 270 < th dose dependent rect. 17 21
446 14.14 radiation 10.0 270 > th dose independent sin 10 NA
451 14.14 humidity 90.0 10 < th dose independent rect. 3 1
454 14.14 radiation 1.0 270 < th dose independent rect. 3 11
457 14.14 radiation 40.0 90 < th dose independent rect. 19 13
462 14.14 radiation 10.0 10 < th dose independent rect. 3 23
464 14.14 wind 1.0 14400 > th dose dependent rect. 11 1
466 14.14 humidity 50.0 720 > th dose dependent rect. 20 1
467 14.14 humidity 80.0 90 < th dose dependent rect. 2 1
468 14.14 humidity 90.0 10 < th dose dependent rect. 3 1
476 14.14 radiation 40.0 90 < th dose dependent rect. 3 12
483 14.15 temperature 20.0 90 < th dose independent rect. 2 6
488 14.15 atmosphere 1000.0 720 > th dose independent rect. 21 14
498 14.15 atmosphere 1005.0 10 > th dose dependent rect. 2 2
502 14.15 radiation 40.0 90 < th dose dependent rect. 3 10
504 14.16 radiation 20.0 90 > th dose independent sin 7 NA
508 14.16 precipitation 0.1 1440 < th dose independent rect. 8 1
521 14.16 radiation 20.0 90 < th dose independent rect. 2 13
529 14.16 radiation 10.0 270 > th dose independent rect. 14 21
532 14.16 precipitation 0.1 1440 < th dose dependent rect. 8 1
548 14.17 radiation 1.0 270 < th dose independent sin 3 NA
552 14.17 radiation 10.0 270 > th dose independent rect. 6 4
557 14.17 radiation 20.0 90 < th dose independent rect. 3 8
560 14.17 temperature 10.0 1440 > th dose independent rect. 9 11
565 14.17 temperature 10.0 1440 > th dose independent rect. 20 13
568 14.17 humidity 50.0 1440 > th dose independent rect. 20 13
579 14.17 temperature 30.0 270 < th dose independent rect. 9 23
587 14.17 radiation 40.0 90 < th dose dependent rect. 3 8
599 14.18 temperature 20.0 270 < th dose independent rect. 24 8
603 14.18 radiation 20.0 90 < th dose independent rect. 2 11
609 14.18 radiation 10.0 10 < th dose independent rect. 21 23
610 14.18 radiation 40.0 90 < th dose dependent sin 4 NA
614 14.18 radiation 1.0 90 > th dose dependent rect. 9 2
624 14.19 radiation 20.0 90 > th dose independent rect. 9 2
625 14.19 temperature 20.0 270 < th dose independent rect. 3 4
628 14.19 wind 1.0 90 > th dose independent rect. 19 13
630 14.19 atmosphere 1015.0 90 < th dose independent rect. 19 13
638 14.19 wind 1.0 30 > th dose independent rect. 8 23
639 14.19 humidity 50.0 30 > th dose independent rect. 8 23
648 14.19 wind 1.0 14400 > th dose dependent rect. 10 4
651 14.19 radiation 1.0 270 < th dose dependent rect. 3 7
671 14.20 wind 5.0 30 < th dose independent rect. 2 6
694 14.20 atmosphere 1000.0 10 < th dose dependent rect. 7 20
695 14.20 radiation 40.0 90 < th dose dependent rect. 1 23
707 14.21 temperature 30.0 4320 < th dose independent rect. 23 10
711 14.21 radiation 1.0 90 > th dose independent rect. 8 11
730 14.21 radiation 30.0 90 > th dose independent rect. 14 21
737 14.21 wind 7.0 30 < th dose dependent rect. 2 6
751 14.22 atmosphere 1015.0 720 < th dose independent rect. 20 1
779 14.22 atmosphere 1000.0 10 > th dose independent rect. 21 23
781 14.22 radiation 1.0 270 > th dose independent rect. 13 23
792 14.22 temperature 30.0 30 < th dose dependent rect. 2 6
806 14.22 radiation 1.0 270 < th dose dependent rect. 22 23
813 14.23 humidity 90.0 10 < th dose independent rect. 5 7
815 14.23 radiation 1.0 270 < th dose independent rect. 3 7
816 14.23 atmosphere 995.0 720 > th dose independent rect. 7 8
823 14.23 humidity 90.0 10 < th dose independent rect. 8 11
854 14.23 radiation 1.0 10 > th dose dependent rect. 7 1
882 14.24 radiation 20.0 90 < th dose independent sin 4 NA
889 14.24 atmosphere 1000.0 30 > th dose independent rect. 2 6
892 14.24 temperature 25.0 10 < th dose independent rect. 2 7
894 14.24 humidity 80.0 90 > th dose independent rect. 3 8
899 14.24 humidity 50.0 90 > th dose independent rect. 8 11
910 14.24 humidity 90.0 10 < th dose independent rect. 5 13
923 14.24 atmosphere 1000.0 10 < th dose independent rect. 22 20
926 14.24 radiation 1.0 270 < th dose independent rect. 17 21
928 14.24 atmosphere 1000.0 10 < th dose independent rect. 13 22
935 14.24 humidity 80.0 90 > th dose dependent sin 3 NA
938 14.24 radiation 40.0 30 < th dose dependent rect. 7 1
948 14.24 humidity 80.0 90 > th dose dependent rect. 3 12
955 14.24 radiation 1.0 270 > th dose dependent rect. 14 21
956 14.24 temperature 10.0 30 > th dose dependent rect. 8 23
958 14.24 radiation 1.0 270 < th dose dependent rect. 9 23
959 14.25 atmosphere 1000.0 30 > th dose independent sin 1 NA
967 14.25 temperature 10.0 720 > th dose independent rect. 20 1
968 14.25 temperature 30.0 4320 < th dose independent rect. 8 1
969 14.25 temperature 30.0 720 < th dose independent rect. 20 1
970 14.25 humidity 50.0 720 > th dose independent rect. 20 1
973 14.25 atmosphere 995.0 720 > th dose independent rect. 20 1
975 14.25 radiation 1.0 720 < th dose independent rect. 20 1
980 14.25 precipitation 0.1 720 < th dose independent rect. 20 1
987 14.25 humidity 90.0 10 > th dose independent rect. 4 6