Os11g0429100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR type resistance protein (Fragment).
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Os11g0429100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR type resistance protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.46 | 0.498 | 6.3 | 0.617 | 0.187 | 0.892 | -0.0564 | -1.49 | 0.879 | 17.5 | 91.01 | 27 | -- | -- |
| 115.53 | 0.504 | 6.29 | 0.565 | 0.178 | 0.851 | 0.887 | -- | 0.85 | 15.2 | 91 | 21 | -- | -- |
| 112.46 | 0.494 | 6.3 | 0.615 | 0.19 | 0.896 | -- | -1.47 | 0.879 | 17.4 | 91 | 26 | -- | -- |
| 117 | 0.504 | 6.29 | 0.59 | 0.199 | 0.804 | -- | -- | 0.86 | 17.5 | 91.01 | 25 | -- | -- |
| 113.87 | 0.497 | 6.3 | 0.627 | -- | 0.783 | -- | -1.48 | 0.861 | -- | 91.03 | 26 | -- | -- |
| 130.72 | 0.536 | 6.32 | 0.662 | 0.192 | -- | -0.564 | -- | 0.717 | 1.19 | -- | -- | -- | -- |
| 131.96 | 0.538 | 6.32 | 0.681 | 0.198 | -- | -- | -- | 0.719 | 1.9 | -- | -- | -- | -- |
| 118.54 | 0.507 | 6.29 | 0.598 | -- | 0.687 | -- | -- | 0.837 | -- | 91 | 25 | -- | -- |
| 126.02 | 0.523 | 6.3 | -- | 0.219 | 0.877 | -- | -- | 0.807 | 17.3 | 91 | 26 | -- | -- |
| 134.32 | 0.542 | 6.32 | 0.689 | -- | -- | -- | -- | 0.724 | -- | -- | -- | -- | -- |
| 144.18 | 0.562 | 6.34 | -- | 0.21 | -- | -- | -- | 0.643 | 1.98 | -- | -- | -- | -- |
| 127.87 | 0.527 | 6.31 | -- | -- | 0.741 | -- | -- | 0.778 | -- | 91 | 26 | -- | -- |
| 146.84 | 0.566 | 6.34 | -- | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.36 | humidity | 90 | 90 | > th | dose dependent | rect. | 13 | 17 |
| 3 | 110.37 | humidity | 90 | 90 | > th | dose dependent | rect. | 17 | 13 |
| 7 | 110.51 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 10 | 110.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 11 | 110.92 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 14 |
| 16 | 111.19 | humidity | 90 | 90 | > th | dose dependent | rect. | 23 | 7 |
| 21 | 111.37 | humidity | 90 | 90 | > th | dose dependent | rect. | 21 | 9 |
| 53 | 112.36 | humidity | 70 | 270 | > th | dose dependent | rect. | 19 | 11 |
| 56 | 112.40 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 91 | 112.63 | humidity | 70 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 97 | 112.77 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 15 |
| 106 | 112.92 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 107 | 112.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 120 | 113.02 | humidity | 50 | 90 | > th | dose dependent | rect. | 12 | 19 |
| 121 | 113.05 | humidity | 90 | 30 | > th | dose dependent | sin | 7 | NA |
| 122 | 113.05 | humidity | 50 | 10 | > th | dose dependent | rect. | 12 | 19 |
| 131 | 113.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 150 | 113.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 167 | 113.28 | humidity | 90 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 218 | 113.43 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 227 | 113.45 | humidity | 90 | 90 | > th | dose independent | rect. | 23 | 7 |
| 253 | 113.58 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 6 |
| 293 | 113.77 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 300 | 113.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 335 | 113.95 | temperature | 30 | 10 | < th | dose independent | rect. | 7 | 6 |
| 337 | 113.95 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 355 | 114.02 | humidity | 90 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 392 | 114.16 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 417 | 114.22 | radiation | 40 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 432 | 114.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 440 | 114.27 | humidity | 90 | 30 | > th | dose dependent | no | NA | NA |
| 445 | 114.27 | humidity | 90 | 30 | > th | dose dependent | rect. | 17 | 21 |
| 455 | 114.27 | humidity | 90 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 456 | 114.27 | humidity | 90 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 471 | 114.32 | humidity | 90 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 491 | 114.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 505 | 114.38 | humidity | 90 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 516 | 114.40 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 535 | 114.43 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 5 | 2 |
| 536 | 114.43 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 543 | 114.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 552 | 114.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 589 | 114.49 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 615 | 114.51 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 638 | 114.54 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 12 | 19 |
| 651 | 114.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 662 | 114.57 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 6 |
| 740 | 114.63 | humidity | 90 | 270 | > th | dose dependent | sin | 13 | NA |
| 843 | 114.76 | humidity | 90 | 30 | > th | dose independent | rect. | 5 | 2 |
| 845 | 114.76 | radiation | 10 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 870 | 114.78 | radiation | 10 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 947 | 114.84 | humidity | 90 | 90 | > th | dose independent | rect. | 17 | 13 |
| 948 | 114.84 | humidity | 90 | 90 | > th | dose independent | rect. | 13 | 17 |