Os11g0428500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0428500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.89 | 0.453 | 7.75 | 1.75 | 0.224 | -0.651 | 1.55 | 0.45 | 0.0619 | 6.72 | 20.24 | 10 | -- | -- |
| 93.53 | 0.45 | 7.76 | 1.66 | 0.191 | -0.678 | 1.62 | -- | 0.0483 | 7.28 | 20.57 | 21 | -- | -- |
| 96.41 | 0.461 | 7.76 | 1.75 | 0.307 | -0.616 | -- | 0.427 | 0.044 | 4.2 | 20.2 | 2 | -- | -- |
| 97.37 | 0.463 | 7.77 | 1.67 | 0.299 | -0.64 | -- | -- | 0.0281 | 4.23 | 20.2 | 2 | -- | -- |
| 101.31 | 0.471 | 7.76 | 1.76 | -- | -0.683 | -- | 0.366 | 0.0615 | -- | 20.2 | 2 | -- | -- |
| 114.14 | 0.501 | 7.79 | 1.5 | 0.3 | -- | 1.45 | -- | -0.0817 | 6 | -- | -- | -- | -- |
| 114.35 | 0.501 | 7.8 | 1.51 | 0.416 | -- | -- | -- | -0.091 | 3.18 | -- | -- | -- | -- |
| 102.02 | 0.472 | 7.77 | 1.7 | -- | -0.702 | -- | -- | 0.0473 | -- | 20.2 | 2 | -- | -- |
| 168.12 | 0.607 | 7.82 | -- | 0.375 | -0.379 | -- | -- | -0.199 | 3.68 | 20.26 | 2 | -- | -- |
| 124.17 | 0.521 | 7.8 | 1.53 | -- | -- | -- | -- | -0.0801 | -- | -- | -- | -- | -- |
| 174.33 | 0.618 | 7.84 | -- | 0.445 | -- | -- | -- | -0.259 | 3.19 | -- | -- | -- | -- |
| 175.57 | 0.619 | 7.82 | -- | -- | -0.465 | -- | -- | -0.178 | -- | 20.37 | 2 | -- | -- |
| 185.62 | 0.636 | 7.83 | -- | -- | -- | -- | -- | -0.249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.35 | temperature | 20 | 10 | < th | dose independent | sin | 14 | NA |
| 4 | 87.29 | temperature | 20 | 10 | < th | dose independent | rect. | 13 | 17 |
| 5 | 87.34 | temperature | 20 | 10 | < th | dose independent | rect. | 13 | 19 |
| 11 | 87.56 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 15 |
| 14 | 87.58 | temperature | 20 | 10 | < th | dose independent | rect. | 13 | 13 |
| 20 | 87.72 | temperature | 20 | 10 | > th | dose independent | sin | 16 | NA |
| 22 | 87.76 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 14 |
| 28 | 87.96 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 14 |
| 30 | 88.02 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 16 |
| 43 | 88.24 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 10 |
| 207 | 90.26 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 14 |
| 222 | 90.37 | temperature | 25 | 90 | < th | dose dependent | sin | 16 | NA |
| 233 | 90.47 | temperature | 25 | 10 | < th | dose dependent | sin | 15 | NA |
| 234 | 90.48 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 13 |
| 240 | 90.51 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 13 |
| 284 | 90.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 11 |
| 360 | 91.46 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 10 |
| 385 | 91.70 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 405 | 91.91 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 17 |
| 413 | 91.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 426 | 92.03 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 21 |
| 439 | 92.13 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 21 |
| 446 | 92.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 21 |
| 524 | 92.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 560 | 92.83 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 23 |
| 569 | 92.89 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 583 | 92.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 618 | 93.20 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 638 | 93.27 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 22 |
| 640 | 93.28 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 20 |
| 643 | 93.29 | temperature | 20 | 10 | < th | dose independent | rect. | 7 | 23 |
| 645 | 93.30 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 646 | 93.30 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 23 |
| 657 | 93.35 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 664 | 93.38 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 670 | 93.39 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 23 |
| 711 | 93.48 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 729 | 93.55 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 734 | 93.58 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 760 | 93.69 | radiation | 30 | 720 | < th | dose independent | rect. | 15 | 17 |
| 770 | 93.73 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 11 |
| 782 | 93.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 818 | 93.94 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 23 |
| 859 | 94.10 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 867 | 94.13 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |
| 870 | 94.14 | radiation | 20 | 720 | < th | dose independent | rect. | 24 | 19 |
| 890 | 94.22 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 16 |
| 918 | 94.33 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 17 |
| 990 | 94.53 | radiation | 20 | 720 | < th | dose dependent | rect. | 24 | 19 |