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Os11g0425600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Four F5 protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.9 (0.0122) R2 : 0.0546
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.132 (0.0257) R2dN8 : 0.0706 R2N8 : 0.0546
σ : 0.23
deviance : 24.25
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.89 0.199 16.1 -0.282 0.216 -0.351 -0.00799 -2 0.0417 1.22 7.954 21379 -- --
21.33 0.215 15.9 0.134 0.211 -0.157 -0.0308 -- 0.191 1.06 10.35 32926 -- --
17.81 0.197 16.1 -0.262 0.215 -0.355 -- -1.96 0.0412 1.15 7.722 23604 -- --
19.76 0.207 15.9 0.299 0.215 -0.296 -- -- 0.28 1.24 25.9 47520 -- --
20.67 0.212 16.1 -0.27 -- -0.335 -- -1.95 0.0384 -- 7.863 23404 -- --
21.6 0.218 16 -0.0144 0.206 -- -0.0434 -- 0.127 1.2 -- -- -- --
21.61 0.218 16 -0.0129 0.206 -- -- -- 0.127 1.19 -- -- -- --
22.63 0.222 15.9 0.275 -- -0.276 -- -- 0.269 -- 26.1 47520 -- --
20.31 0.21 15.9 -- 0.24 -0.167 -- -- 0.221 0.804 29.1 15815 -- --
24.25 0.23 15.9 -0.00491 -- -- -- -- 0.131 -- -- -- -- --
21.61 0.217 16 -- 0.206 -- -- -- 0.129 1.19 -- -- -- --
23.07 0.224 15.9 -- -- -0.159 -- -- 0.229 -- 30.2 17331 -- --
24.25 0.23 15.9 -- -- -- -- -- 0.132 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.04 humidity 90.0 14400 > th dose independent rect. 20 11
6 17.07 humidity 90.0 14400 > th dose independent rect. 20 8
21 17.13 humidity 90.0 14400 > th dose independent sin 10 NA
40 17.21 humidity 90.0 14400 > th dose independent rect. 22 3
44 17.22 humidity 90.0 14400 > th dose independent rect. 23 1
62 17.29 humidity 90.0 14400 < th dose independent rect. 19 9
66 17.30 humidity 90.0 14400 < th dose independent rect. 19 11
70 17.32 radiation 1.0 14400 > th dose independent rect. 18 1
93 17.35 temperature 25.0 43200 < th dose dependent rect. 10 1
110 17.39 humidity 90.0 14400 < th dose independent rect. 23 10
113 17.39 radiation 1.0 14400 < th dose independent rect. 18 11
140 17.42 humidity 90.0 14400 < th dose independent sin 10 NA
150 17.43 temperature 20.0 43200 > th dose independent rect. 7 1
151 17.43 humidity 90.0 14400 < th dose independent rect. 21 4
157 17.43 temperature 20.0 43200 > th dose independent rect. 7 18
162 17.44 temperature 20.0 43200 < th dose independent rect. 7 1
177 17.45 temperature 20.0 43200 > th dose independent sin 17 NA
187 17.45 temperature 20.0 43200 > th dose independent rect. 10 15
194 17.45 temperature 20.0 43200 < th dose independent rect. 7 18
195 17.45 temperature 20.0 43200 > th dose independent rect. 4 19
204 17.46 temperature 20.0 43200 < th dose independent sin 17 NA
207 17.46 temperature 20.0 43200 < th dose independent rect. 17 6
209 17.46 temperature 20.0 43200 > th dose independent rect. 15 10
248 17.47 temperature 20.0 43200 > th dose independent rect. 17 6
302 17.48 temperature 20.0 43200 < th dose independent rect. 20 1
308 17.48 temperature 10.0 43200 > th dose independent rect. 10 7
338 17.48 temperature 20.0 43200 < th dose independent rect. 4 18
430 17.50 temperature 20.0 43200 > th dose independent no NA NA
433 17.50 wind 1.0 43200 < th dose independent rect. 2 3
435 17.50 temperature 20.0 43200 > th dose independent rect. 17 4
480 17.51 temperature 20.0 43200 < th dose independent no NA NA
483 17.51 temperature 20.0 43200 > th dose independent rect. 20 3
511 17.51 temperature 20.0 43200 > th dose independent rect. 14 21
513 17.51 temperature 20.0 43200 > th dose independent rect. 11 22
537 17.51 temperature 25.0 43200 < th dose dependent sin 22 NA
540 17.51 humidity 90.0 14400 > th dose dependent rect. 4 4
588 17.52 temperature 20.0 43200 < th dose independent rect. 13 21
595 17.52 temperature 20.0 43200 < th dose independent rect. 11 22
622 17.52 wind 1.0 43200 < th dose dependent rect. 4 3
638 17.53 humidity 90.0 14400 > th dose independent rect. 3 5
667 17.53 temperature 20.0 43200 < th dose independent rect. 14 19
714 17.54 radiation 1.0 14400 < th dose independent rect. 18 2
722 17.54 radiation 1.0 14400 < th dose independent rect. 18 6
770 17.54 temperature 25.0 43200 < th dose dependent rect. 15 1
784 17.55 temperature 20.0 43200 > th dose independent rect. 18 1
794 17.55 precipitation 0.1 43200 < th dose independent rect. 6 3
849 17.55 precipitation 0.1 43200 < th dose dependent rect. 6 3
864 17.56 temperature 25.0 43200 < th dose independent rect. 12 1
924 17.57 temperature 25.0 43200 > th dose independent rect. 12 1
933 17.57 temperature 20.0 43200 > th dose independent rect. 4 13
983 17.58 temperature 20.0 43200 > th dose independent rect. 4 11