Os11g0422100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0422100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.31 | 0.562 | 4.43 | 2.08 | 0.826 | 1.25 | -0.355 | 3.17 | 1.34 | 16.8 | 20.85 | 1115 | -- | -- |
| 148.38 | 0.567 | 4.51 | 1.23 | 0.826 | 1.48 | -0.48 | -- | 1.16 | 16.4 | 23.4 | 1111 | -- | -- |
| 143.61 | 0.558 | 4.42 | 2.1 | 0.825 | 1.24 | -- | 3.24 | 1.35 | 16.8 | 20.8 | 1127 | -- | -- |
| 148.97 | 0.568 | 4.52 | 1.23 | 0.858 | 1.43 | -- | -- | 1.15 | 16.7 | 23.4 | 1153 | -- | -- |
| 167.65 | 0.603 | 4.45 | 1.81 | -- | 1.48 | -- | 2.7 | 1.25 | -- | 20.05 | 706 | -- | -- |
| 214.12 | 0.686 | 4.46 | 1.67 | 0.755 | -- | -0.2 | -- | 1.41 | 18 | -- | -- | -- | -- |
| 214.2 | 0.685 | 4.46 | 1.67 | 0.754 | -- | -- | -- | 1.4 | 18.1 | -- | -- | -- | -- |
| 172.49 | 0.612 | 4.51 | 1.22 | -- | 1.64 | -- | -- | 1.11 | -- | 21.4 | 686 | -- | -- |
| 185.1 | 0.634 | 4.56 | -- | 0.83 | 1.76 | -- | -- | 0.948 | 16.5 | 22.94 | 1153 | -- | -- |
| 243.64 | 0.729 | 4.45 | 1.65 | -- | -- | -- | -- | 1.39 | -- | -- | -- | -- | -- |
| 287.78 | 0.794 | 4.51 | -- | 0.73 | -- | -- | -- | 1.22 | 18.2 | -- | -- | -- | -- |
| 205.55 | 0.668 | 4.57 | -- | -- | 1.86 | -- | -- | 0.865 | -- | 20.47 | 2015 | -- | -- |
| 315.4 | 0.829 | 4.49 | -- | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.07 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 3 | 141.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 8 | 141.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 10 | 141.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 49 | 143.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 61 | 144.16 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 123 | 145.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 17 |
| 249 | 146.03 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 309 | 146.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 354 | 146.67 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 381 | 146.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 403 | 146.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 496 | 147.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 500 | 147.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 588 | 147.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 598 | 147.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 706 | 148.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 846 | 148.53 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 893 | 148.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 905 | 148.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 23 |