Os11g0417400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein phosphatase 2C-like domain containing protein.
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Os11g0417400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein phosphatase 2C-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.61 | 0.467 | 3.33 | -0.521 | 0.308 | -0.771 | -1.54 | 1.06 | -0.167 | 0.0449 | 20.03 | 251 | -- | -- |
| 101.52 | 0.469 | 3.36 | -0.559 | 0.338 | -1.03 | -1.44 | -- | -0.181 | 0.136 | 19.7 | 283 | -- | -- |
| 108.87 | 0.486 | 3.33 | -0.521 | 0.308 | -0.771 | -- | 1.36 | -0.167 | 0.0449 | 20.03 | 251 | -- | -- |
| 112.09 | 0.493 | 3.35 | -0.542 | 0.316 | -1.12 | -- | -- | -0.199 | 0.894 | 19.3 | 268 | -- | -- |
| 112.75 | 0.495 | 3.32 | -0.375 | -- | -0.911 | -- | 1.4 | -0.148 | -- | 19.4 | 207 | -- | -- |
| 127.03 | 0.528 | 3.39 | -0.967 | 0.426 | -- | -1.79 | -- | -0.362 | 0.785 | -- | -- | -- | -- |
| 140.02 | 0.554 | 3.39 | -0.903 | 0.447 | -- | -- | -- | -0.355 | 1.74 | -- | -- | -- | -- |
| 115.67 | 0.501 | 3.35 | -0.46 | -- | -1.29 | -- | -- | -0.185 | -- | 19 | 197 | -- | -- |
| 117.05 | 0.504 | 3.34 | -- | 0.238 | -1.35 | -- | -- | -0.117 | 0.753 | 19.08 | 220 | -- | -- |
| 152.2 | 0.576 | 3.38 | -0.885 | -- | -- | -- | -- | -0.345 | -- | -- | -- | -- | -- |
| 161.52 | 0.595 | 3.36 | -- | 0.431 | -- | -- | -- | -0.255 | 1.67 | -- | -- | -- | -- |
| 121.06 | 0.512 | 3.33 | -- | -- | -1.47 | -- | -- | -0.113 | -- | 19 | 204 | -- | -- |
| 172.85 | 0.614 | 3.36 | -- | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.18 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 3 | 92.70 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 36 | 93.92 | temperature | 20 | 270 | < th | dose independent | rect. | 16 | 17 |
| 50 | 94.35 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 61 | 94.58 | temperature | 20 | 270 | < th | dose independent | rect. | 16 | 14 |
| 90 | 95.17 | temperature | 25 | 270 | < th | dose dependent | sin | 11 | NA |
| 109 | 95.53 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 155 | 96.00 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 165 | 96.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 265 | 97.41 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 13 |
| 272 | 97.62 | temperature | 15 | 270 | > th | dose dependent | sin | 11 | NA |
| 289 | 97.83 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 23 |
| 296 | 97.90 | temperature | 20 | 270 | > th | dose independent | rect. | 8 | 23 |
| 305 | 98.06 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 23 |
| 306 | 98.08 | humidity | 90 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 315 | 98.18 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 23 |
| 333 | 98.34 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 344 | 98.43 | humidity | 90 | 14400 | > th | dose independent | rect. | 16 | 11 |
| 345 | 98.43 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 23 |
| 347 | 98.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 355 | 98.50 | humidity | 90 | 14400 | < th | dose independent | sin | 15 | NA |
| 373 | 98.57 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 390 | 98.69 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 406 | 98.75 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 410 | 98.76 | humidity | 90 | 14400 | > th | dose independent | sin | 14 | NA |
| 415 | 98.78 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 23 |
| 477 | 99.05 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 480 | 99.06 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 23 |
| 506 | 99.16 | temperature | 20 | 270 | < th | dose independent | rect. | 20 | 23 |
| 517 | 99.21 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 723 | 99.79 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 18 |
| 737 | 99.82 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 14 |
| 772 | 99.90 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 783 | 99.92 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 23 |
| 805 | 99.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 812 | 99.99 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 867 | 100.11 | temperature | 20 | 10 | < th | dose independent | sin | 8 | NA |
| 906 | 100.17 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 907 | 100.17 | radiation | 10 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 933 | 100.23 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 945 | 100.27 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 23 |