Os11g0417200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os11g0417200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.14 | 0.388 | 2.89 | -0.0417 | 0.115 | 0.858 | -0.344 | 2.37 | 0.0558 | 2.92 | 52.63 | 49 | -- | -- |
| 71.39 | 0.394 | 2.88 | -0.00212 | 0.119 | 0.656 | -0.541 | -- | 0.08 | 2.51 | 54.07 | 35 | -- | -- |
| 68.5 | 0.385 | 2.89 | -0.042 | 0.111 | 0.881 | -- | 2.59 | 0.0559 | 2.79 | 52.98 | 48 | -- | -- |
| 72.47 | 0.396 | 2.87 | -0.0144 | 0.102 | 0.437 | -- | -- | 0.0648 | 2.71 | 50 | 35 | -- | -- |
| 69.13 | 0.387 | 2.89 | -0.0387 | -- | 0.903 | -- | 2.82 | 0.0569 | -- | 54.02 | 48 | -- | -- |
| 72.73 | 0.4 | 2.88 | -0.0499 | 0.0648 | -- | -0.548 | -- | 0.045 | 2.68 | -- | -- | -- | -- |
| 73.72 | 0.402 | 2.88 | -0.0366 | 0.0734 | -- | -- | -- | 0.0479 | 4.4 | -- | -- | -- | -- |
| 72.35 | 0.396 | 2.87 | 0.0159 | -- | 0.894 | -- | -- | 0.137 | -- | 60 | 15 | -- | -- |
| 72.47 | 0.396 | 2.87 | -- | 0.104 | 0.44 | -- | -- | 0.0642 | 2.81 | 50 | 35 | -- | -- |
| 74.01 | 0.402 | 2.88 | -0.0337 | -- | -- | -- | -- | 0.0498 | -- | -- | -- | -- | -- |
| 73.76 | 0.402 | 2.88 | -- | 0.0728 | -- | -- | -- | 0.052 | 4.41 | -- | -- | -- | -- |
| 71.67 | 0.394 | 2.87 | -- | -- | 0.688 | -- | -- | 0.0661 | -- | 60 | 15 | -- | -- |
| 74.04 | 0.402 | 2.88 | -- | -- | -- | -- | -- | 0.0536 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.49 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 5 | 62.16 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 18 | 62.52 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 25 | 63.21 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 27 | 63.37 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 39 | 63.60 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 43 | 64.03 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 54 | 65.26 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 55 | 65.29 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 3 |
| 59 | 65.29 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 3 |
| 63 | 65.30 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 69 | 65.30 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 76 | 65.34 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 82 | 65.42 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 88 | 65.67 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 91 | 65.73 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 99 | 65.78 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 102 | 65.78 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 106 | 65.78 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 108 | 65.78 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 113 | 65.78 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 114 | 65.78 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 115 | 65.78 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 120 | 65.78 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 121 | 65.84 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 1 | 2 |
| 124 | 65.92 | wind | 9.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 126 | 66.05 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 132 | 66.12 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 134 | 66.14 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 182 | 66.26 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 184 | 66.27 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 221 | 66.76 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 222 | 66.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 225 | 66.76 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 229 | 66.76 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 239 | 66.76 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 240 | 66.76 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 260 | 66.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 264 | 66.76 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 278 | 66.79 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 282 | 66.79 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 291 | 66.92 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 376 | 67.51 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 392 | 67.55 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 435 | 67.72 | temperature | 30.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 499 | 67.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 501 | 68.04 | temperature | 30.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 595 | 68.44 | radiation | 40.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 648 | 68.63 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 1 |
| 650 | 68.63 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 665 | 68.66 | humidity | 90.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 678 | 68.67 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 697 | 68.74 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 877 | 69.11 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 879 | 69.11 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 884 | 69.12 | temperature | 25.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 903 | 69.16 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 915 | 69.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 918 | 69.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 922 | 69.19 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 928 | 69.19 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 929 | 69.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 949 | 69.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 978 | 69.22 | wind | 7.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 984 | 69.23 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 987 | 69.23 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 988 | 69.23 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 990 | 69.23 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 993 | 69.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 995 | 69.24 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 996 | 69.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 999 | 69.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 1000 | 69.24 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |