Os11g0416900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os11g0416900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.52 | 0.403 | 10.4 | -1.04 | 1.66 | 0.764 | -0.209 | 0.339 | -0.365 | 3.84 | 23.7 | 4584 | -- | -- |
| 73.5 | 0.399 | 10.4 | -1.11 | 1.65 | 0.746 | -0.287 | -- | -0.398 | 3.81 | 24.39 | 5747 | -- | -- |
| 73.65 | 0.4 | 10.4 | -1.03 | 1.66 | 0.762 | -- | 0.348 | -0.361 | 3.85 | 23.74 | 4583 | -- | -- |
| 73.7 | 0.4 | 10.4 | -1.12 | 1.64 | 0.741 | -- | -- | -0.408 | 3.81 | 24.3 | 5746 | -- | -- |
| 209.94 | 0.675 | 10.4 | -0.999 | -- | 0.988 | -- | 0.289 | -0.386 | -- | 24 | 1224 | -- | -- |
| 93.12 | 0.452 | 10.4 | -0.829 | 1.68 | -- | -0.175 | -- | -0.304 | 3.79 | -- | -- | -- | -- |
| 93.22 | 0.452 | 10.4 | -0.826 | 1.68 | -- | -- | -- | -0.303 | 3.79 | -- | -- | -- | -- |
| 209.71 | 0.674 | 10.4 | -1.1 | -- | 1.05 | -- | -- | -0.43 | -- | 23.9 | 1226 | -- | -- |
| 100.98 | 0.468 | 10.3 | -- | 1.63 | 0.492 | -- | -- | -0.146 | 3.77 | 28.7 | 5729 | -- | -- |
| 248.86 | 0.737 | 10.4 | -0.757 | -- | -- | -- | -- | -0.258 | -- | -- | -- | -- | -- |
| 111.22 | 0.493 | 10.3 | -- | 1.66 | -- | -- | -- | -0.211 | 3.79 | -- | -- | -- | -- |
| 237.25 | 0.72 | 10.3 | -- | -- | -1.02 | -- | -- | -0.0802 | -- | 24.1 | 1220 | -- | -- |
| 263.97 | 0.758 | 10.4 | -- | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.87 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 2 | 73.02 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 13 |
| 9 | 73.20 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 14 | 73.26 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 19 | 73.29 | temperature | 25 | 4320 | > th | dose dependent | sin | 6 | NA |
| 20 | 73.30 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 22 | 73.31 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 34 | 73.37 | temperature | 30 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 63 | 73.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 79 | 73.51 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 106 | 73.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 112 | 73.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 114 | 73.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 136 | 73.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 218 | 73.73 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 224 | 73.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 255 | 73.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 256 | 73.81 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 310 | 73.91 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 312 | 73.91 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 23 |
| 319 | 73.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 20 |
| 344 | 73.95 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 369 | 73.98 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 408 | 74.02 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 23 |
| 499 | 74.12 | temperature | 30 | 1440 | > th | dose independent | sin | 8 | NA |
| 600 | 74.24 | temperature | 25 | 4320 | < th | dose independent | sin | 6 | NA |
| 621 | 74.28 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 655 | 74.31 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 656 | 74.31 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 686 | 74.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 766 | 74.43 | temperature | 30 | 4320 | < th | dose independent | sin | 9 | NA |
| 835 | 74.47 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 12 |
| 957 | 74.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 18 |
| 990 | 74.60 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 991 | 74.60 | temperature | 30 | 4320 | > th | dose independent | rect. | 16 | 1 |