Os11g0311300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exoribonuclease domain containing protein.
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Os11g0311300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exoribonuclease domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.98 | 0.387 | 7.42 | 1.54 | 1.78 | 0.554 | 0.426 | -0.119 | 0.155 | 18.1 | 10 | 257 | -- | -- |
| 67.74 | 0.383 | 7.41 | 1.54 | 1.79 | 0.578 | 0.41 | -- | 0.154 | 18.2 | 10.23 | 228 | -- | -- |
| 68.23 | 0.385 | 7.42 | 1.55 | 1.78 | 0.543 | -- | -0.0362 | 0.162 | 18.1 | 10 | 241 | -- | -- |
| 68.04 | 0.384 | 7.42 | 1.53 | 1.8 | 0.587 | -- | -- | 0.159 | 18.2 | 10.01 | 221 | -- | -- |
| 81.2 | 0.42 | 7.41 | 1.61 | -- | 2.35 | -- | 0.493 | 0.0148 | -- | 1.36 | 660 | -- | -- |
| 73.48 | 0.402 | 7.4 | 1.63 | 2.1 | -- | 0.431 | -- | 0.208 | 17.3 | -- | -- | -- | -- |
| 73.94 | 0.403 | 7.4 | 1.63 | 2.1 | -- | -- | -- | 0.21 | 17.3 | -- | -- | -- | -- |
| 80.18 | 0.417 | 7.38 | 1.51 | -- | 2.37 | -- | -- | 0.103 | -- | 1.36 | 668 | -- | -- |
| 128.69 | 0.528 | 7.47 | -- | 1.74 | 0.796 | -- | -- | -0.0415 | 18.7 | 10.01 | 215 | -- | -- |
| 303.67 | 0.814 | 7.37 | 1.55 | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
| 143.69 | 0.561 | 7.44 | -- | 2.07 | -- | -- | -- | 0.0284 | 17.3 | -- | -- | -- | -- |
| 135.56 | 0.542 | 7.38 | -- | -- | 2.41 | -- | -- | 0.0345 | -- | 0.54 | 683 | -- | -- |
| 367.42 | 0.895 | 7.41 | -- | -- | -- | -- | -- | -0.0151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.90 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 3 | 56.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 9 | 57.32 | wind | 5.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 15 | 57.62 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 16 | 57.62 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 17 | 57.64 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 18 | 57.67 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 4 |
| 19 | 57.67 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 20 | 57.71 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 21 | 57.72 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 29 | 57.77 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 31 | 57.77 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 32 | 57.77 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 34 | 57.77 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 35 | 57.77 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 36 | 57.77 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 41 | 57.83 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 43 | 57.84 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 78 | 58.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 79 | 58.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 80 | 58.25 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 89 | 58.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 92 | 58.40 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 94 | 58.40 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 95 | 58.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 98 | 58.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 99 | 58.40 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 101 | 58.40 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 104 | 58.40 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 105 | 58.41 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 10 |
| 106 | 58.42 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 113 | 58.51 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 117 | 58.57 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 118 | 58.58 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 158 | 58.91 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 203 | 59.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 205 | 59.12 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 207 | 59.12 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 211 | 59.15 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 225 | 59.32 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 226 | 59.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 229 | 59.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 231 | 59.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 232 | 59.32 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 233 | 59.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 382 | 59.74 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 449 | 59.94 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 452 | 59.96 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 10 |
| 454 | 59.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 457 | 59.99 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 460 | 60.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 476 | 60.03 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 520 | 60.18 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 544 | 60.23 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 555 | 60.28 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 579 | 60.33 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 14 |
| 580 | 60.33 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 630 | 60.45 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 669 | 60.57 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 683 | 60.64 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 695 | 60.68 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 746 | 60.88 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 750 | 60.89 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 767 | 60.96 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 796 | 61.04 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 799 | 61.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 22 | 6 |
| 891 | 61.26 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 7 |
| 895 | 61.29 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 906 | 61.32 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 907 | 61.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 909 | 61.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 918 | 61.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 921 | 61.39 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 22 | 6 |
| 924 | 61.40 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 13 |
| 925 | 61.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 13 |
| 958 | 61.50 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 4 |