Os11g0311100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0311100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.81 | 0.36 | 13.5 | -1.81 | 0.726 | -1.19 | 0.279 | 0.211 | -0.0157 | 23.2 | 26.7 | 166 | -- | -- |
| 58.89 | 0.357 | 13.5 | -1.79 | 0.722 | -1.2 | 0.332 | -- | -0.0167 | 23.2 | 26.56 | 168 | -- | -- |
| 59.1 | 0.358 | 13.5 | -1.85 | 0.723 | -1.17 | -- | 0.38 | -0.0209 | 23.2 | 26.85 | 166 | -- | -- |
| 59.29 | 0.359 | 13.5 | -1.78 | 0.72 | -1.19 | -- | -- | -0.00707 | 23.1 | 26.5 | 168 | -- | -- |
| 75.45 | 0.405 | 13.5 | -1.99 | -- | -1.27 | -- | 0.807 | -0.0571 | -- | 28.5 | 738 | -- | -- |
| 79.43 | 0.418 | 13.4 | -1.47 | 0.646 | -- | 0.229 | -- | 0.253 | 21.6 | -- | -- | -- | -- |
| 79.62 | 0.418 | 13.4 | -1.48 | 0.646 | -- | -- | -- | 0.253 | 21.6 | -- | -- | -- | -- |
| 76.01 | 0.406 | 13.5 | -1.85 | -- | -1.29 | -- | -- | -0.028 | -- | 27.7 | 734 | -- | -- |
| 133.96 | 0.542 | 13.4 | -- | 0.7 | -0.444 | -- | -- | 0.332 | 22 | 26.5 | 168 | -- | -- |
| 104.26 | 0.477 | 13.4 | -1.47 | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
| 137.17 | 0.548 | 13.4 | -- | 0.644 | -- | -- | -- | 0.418 | 21.4 | -- | -- | -- | -- |
| 155.15 | 0.58 | 13.4 | -- | -- | -0.576 | -- | -- | 0.313 | -- | 28.71 | 673 | -- | -- |
| 161.47 | 0.593 | 13.4 | -- | -- | -- | -- | -- | 0.415 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 7 | 58.58 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 13 | 58.83 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 24 | 59.34 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 27 | 59.37 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 36 | 59.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 38 | 59.51 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 44 | 59.58 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 22 |
| 66 | 59.91 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 67 | 59.92 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 68 | 59.92 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 89 | 60.19 | temperature | 15 | 90 | > th | dose dependent | sin | 7 | NA |
| 95 | 60.22 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 105 | 60.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 108 | 60.35 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 146 | 60.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 172 | 60.85 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 187 | 60.91 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 212 | 61.07 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 224 | 61.14 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 293 | 61.42 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 328 | 61.53 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 462 | 61.99 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 511 | 62.17 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 532 | 62.22 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 15 |
| 552 | 62.26 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 583 | 62.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 590 | 62.36 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 4 |
| 593 | 62.37 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 17 |
| 631 | 62.45 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 22 |
| 632 | 62.45 | temperature | 20 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 636 | 62.46 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 650 | 62.47 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 656 | 62.48 | temperature | 25 | 14400 | > th | dose independent | sin | 1 | NA |
| 665 | 62.49 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 20 |
| 673 | 62.51 | temperature | 25 | 14400 | < th | dose independent | sin | 0 | NA |
| 684 | 62.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 706 | 62.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 710 | 62.57 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 755 | 62.63 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 810 | 62.69 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 865 | 62.77 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 879 | 62.79 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 886 | 62.80 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 896 | 62.81 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 899 | 62.81 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 918 | 62.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 926 | 62.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 927 | 62.84 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 955 | 62.88 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 8 |