Os11g0307500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0307500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.05 | 0.544 | 9.73 | -1.18 | 1.66 | 0.455 | 0.664 | 0.473 | 0.252 | 1.66 | 20.6 | 10 | -- | -- |
| 134.84 | 0.545 | 9.74 | -1.27 | 1.65 | 0.436 | 0.431 | -- | 0.233 | 1.65 | 20.6 | 10 | -- | -- |
| 135.31 | 0.546 | 9.74 | -1.24 | 1.65 | 0.44 | -- | 0.217 | 0.24 | 1.65 | 20.6 | 10 | -- | -- |
| 135.51 | 0.546 | 9.74 | -1.29 | 1.64 | 0.435 | -- | -- | 0.231 | 1.65 | 20.5 | 9 | -- | -- |
| 207.29 | 0.671 | 9.66 | -0.837 | -- | -0.937 | -- | 0.167 | 0.546 | -- | 26.7 | 5 | -- | -- |
| 143.21 | 0.561 | 9.72 | -1.17 | 1.54 | -- | 0.36 | -- | 0.318 | 1.69 | -- | -- | -- | -- |
| 143.72 | 0.561 | 9.72 | -1.18 | 1.54 | -- | -- | -- | 0.316 | 1.7 | -- | -- | -- | -- |
| 206.89 | 0.67 | 9.66 | -0.867 | -- | -0.937 | -- | -- | 0.527 | -- | 26.75 | 2 | -- | -- |
| 177.61 | 0.621 | 9.7 | -- | 1.59 | 0.243 | -- | -- | 0.4 | 1.65 | 20.8 | 9 | -- | -- |
| 288.42 | 0.794 | 9.7 | -1.12 | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
| 180.45 | 0.628 | 9.69 | -- | 1.52 | -- | -- | -- | 0.447 | 1.67 | -- | -- | -- | -- |
| 226.31 | 0.701 | 9.64 | -- | -- | -1 | -- | -- | 0.634 | -- | 26.74 | 2 | -- | -- |
| 321.38 | 0.837 | 9.67 | -- | -- | -- | -- | -- | 0.474 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.78 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 5 | 127.30 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 15 |
| 14 | 128.98 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 15 | 129.00 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 18 |
| 25 | 130.01 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 32 | 130.20 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 34 | 130.26 | temperature | 25.0 | 90 | < th | dose dependent | sin | 14 | NA |
| 36 | 130.30 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 8 |
| 37 | 130.33 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 44 | 130.47 | temperature | 20.0 | 30 | > th | dose independent | sin | 14 | NA |
| 58 | 130.58 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 13 |
| 67 | 130.64 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 73 | 130.65 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 89 | 130.75 | radiation | 1.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 108 | 130.87 | temperature | 20.0 | 10 | < th | dose independent | sin | 13 | NA |
| 112 | 130.89 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 122 | 130.98 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 129 | 131.01 | temperature | 20.0 | 90 | < th | dose independent | sin | 14 | NA |
| 130 | 131.01 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 138 | 131.05 | temperature | 20.0 | 10 | < th | dose independent | rect. | 13 | 15 |
| 141 | 131.05 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 147 | 131.08 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 16 |
| 156 | 131.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 172 | 131.21 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 210 | 131.41 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 239 | 131.52 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 265 | 131.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 15 |
| 273 | 131.66 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 341 | 131.91 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 347 | 131.93 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 18 |
| 356 | 131.96 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 385 | 132.09 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 459 | 132.31 | humidity | 60.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 471 | 132.34 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 479 | 132.34 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 482 | 132.35 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 483 | 132.35 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 488 | 132.36 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 500 | 132.39 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 508 | 132.40 | temperature | 15.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 563 | 132.56 | wind | 3.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 568 | 132.57 | wind | 5.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 582 | 132.60 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 585 | 132.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 23 |
| 615 | 132.69 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 7 |
| 616 | 132.69 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 624 | 132.73 | radiation | 10.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 642 | 132.76 | radiation | 30.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 650 | 132.78 | wind | 7.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 656 | 132.79 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 659 | 132.79 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 662 | 132.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 1 |
| 667 | 132.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 676 | 132.81 | temperature | 25.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 677 | 132.81 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 705 | 132.87 | humidity | 70.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 723 | 132.89 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 732 | 132.90 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 752 | 132.94 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 790 | 132.98 | temperature | 30.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 872 | 133.11 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 900 | 133.14 | wind | 9.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 925 | 133.18 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 23 |