Os11g0303200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0303200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.78 | 0.438 | 3.45 | -0.0473 | 0.176 | -0.851 | -0.528 | -0.257 | 0.773 | 7.81 | 31.29 | 10 | -- | -- |
| 86.82 | 0.437 | 3.45 | -0.0893 | 0.172 | -0.861 | -0.522 | -- | 0.761 | 7.55 | 31.29 | 10 | -- | -- |
| 87.54 | 0.439 | 3.45 | -0.0779 | 0.172 | -0.858 | -- | -0.143 | 0.768 | 7.81 | 31.29 | 10 | -- | -- |
| 87.56 | 0.436 | 3.45 | -0.103 | 0.174 | -0.874 | -- | -- | 0.762 | 7.77 | 31.45 | 5 | -- | -- |
| 89.14 | 0.442 | 3.45 | -0.081 | -- | -0.854 | -- | -0.105 | 0.77 | -- | 31.3 | 7 | -- | -- |
| 96.85 | 0.461 | 3.42 | 0.0958 | 0.313 | -- | -0.12 | -- | 0.911 | 11.9 | -- | -- | -- | -- |
| 96.9 | 0.461 | 3.42 | 0.0914 | 0.314 | -- | -- | -- | 0.911 | 12 | -- | -- | -- | -- |
| 89.06 | 0.44 | 3.46 | -0.1 | -- | -0.859 | -- | -- | 0.763 | -- | 31.3 | 2 | -- | -- |
| 87.73 | 0.436 | 3.45 | -- | 0.17 | -0.822 | -- | -- | 0.779 | 8.16 | 31.4 | 2 | -- | -- |
| 103.1 | 0.474 | 3.42 | 0.0815 | -- | -- | -- | -- | 0.906 | -- | -- | -- | -- | -- |
| 97.12 | 0.461 | 3.42 | -- | 0.313 | -- | -- | -- | 0.901 | 12 | -- | -- | -- | -- |
| 89.31 | 0.44 | 3.45 | -- | -- | -0.831 | -- | -- | 0.779 | -- | 31.3 | 2 | -- | -- |
| 103.28 | 0.474 | 3.43 | -- | -- | -- | -- | -- | 0.897 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.57 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 2 | 84.71 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 4 | 84.80 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 5 | 84.83 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 6 | 84.84 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 16 |
| 10 | 84.96 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 17 | 85.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 20 | 85.12 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 21 | 85.14 | temperature | 30.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 22 | 85.16 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 30 | 85.32 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 36 | 85.38 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 38 | 85.39 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 41 | 85.41 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 44 | 85.42 | temperature | 25.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 45 | 85.42 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 64 | 85.58 | temperature | 10.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 85 | 85.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 99 | 85.78 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 100 | 85.78 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 102 | 85.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 123 | 85.91 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 137 | 85.97 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 166 | 86.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 173 | 86.12 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 209 | 86.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 243 | 86.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 251 | 86.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 253 | 86.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 259 | 86.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 261 | 86.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 273 | 86.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 274 | 86.39 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 275 | 86.39 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 285 | 86.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 300 | 86.45 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 302 | 86.45 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 325 | 86.50 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 328 | 86.50 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 329 | 86.51 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 335 | 86.53 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 358 | 86.58 | temperature | 25.0 | 90 | > th | dose independent | rect. | 3 | 13 |
| 373 | 86.62 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 374 | 86.62 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 377 | 86.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 394 | 86.66 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 11 |
| 428 | 86.73 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 473 | 86.84 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 477 | 86.84 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 510 | 86.91 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 517 | 86.92 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 525 | 86.94 | temperature | 25.0 | 30 | > th | dose independent | rect. | 23 | 17 |
| 541 | 86.97 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 548 | 86.98 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 6 |
| 568 | 87.01 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 623 | 87.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 625 | 87.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 633 | 87.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 639 | 87.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 641 | 87.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 642 | 87.14 | temperature | 20.0 | 10 | > th | dose dependent | no | NA | NA |
| 643 | 87.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 9 |
| 659 | 87.16 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 682 | 87.20 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 686 | 87.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 701 | 87.23 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 9 | 3 |
| 705 | 87.24 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 769 | 87.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 776 | 87.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 789 | 87.37 | temperature | 25.0 | 270 | > th | dose independent | sin | 4 | NA |
| 814 | 87.41 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 837 | 87.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 839 | 87.44 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 864 | 87.49 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 866 | 87.49 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 883 | 87.51 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 888 | 87.52 | temperature | 25.0 | 90 | > th | dose independent | sin | 1 | NA |
| 905 | 87.54 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 930 | 87.57 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 933 | 87.58 | temperature | 25.0 | 90 | > th | dose independent | rect. | 20 | 20 |
| 938 | 87.58 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 988 | 87.64 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 989 | 87.64 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |