Os11g0302600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0302600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.56 | 0.487 | 2.91 | -0.244 | 0.12 | -6.9 | -0.0939 | 23.6 | 0.0674 | 10 | 0.7754 | 8 | -- | -- |
| 114.49 | 0.502 | 2.88 | -0.216 | 0.137 | 0.142 | -0.0223 | -- | 0.0483 | 8.75 | 0.002138 | 7 | -- | -- |
| 107.6 | 0.483 | 2.91 | -0.247 | 0.12 | -6.9 | -- | 23.5 | 0.0674 | 10 | 0.7759 | 7 | -- | -- |
| 114.34 | 0.498 | 2.88 | -0.217 | 0.136 | -0.351 | -- | -- | 0.0532 | 9 | 0.4595 | 5 | -- | -- |
| 108.47 | 0.485 | 2.91 | -0.249 | -- | -6.9 | -- | 23.6 | 0.067 | -- | 0.7739 | 7 | -- | -- |
| 114.51 | 0.502 | 2.88 | -0.217 | 0.137 | -- | -0.0223 | -- | 0.0486 | 8.78 | -- | -- | -- | -- |
| 114.51 | 0.501 | 2.88 | -0.218 | 0.137 | -- | -- | -- | 0.0486 | 8.83 | -- | -- | -- | -- |
| 115.42 | 0.5 | 2.89 | -0.223 | -- | -0.35 | -- | -- | 0.0516 | -- | 0.4488 | 5 | -- | -- |
| 115.65 | 0.501 | 2.88 | -- | 0.137 | -0.292 | -- | -- | 0.0752 | 9.05 | 0.4941 | 5 | -- | -- |
| 115.58 | 0.502 | 2.89 | -0.217 | -- | -- | -- | -- | 0.0496 | -- | -- | -- | -- | -- |
| 115.76 | 0.503 | 2.88 | -- | 0.136 | -- | -- | -- | 0.0728 | 8.95 | -- | -- | -- | -- |
| 116.73 | 0.503 | 2.88 | -- | -- | -0.272 | -- | -- | 0.0758 | -- | 0.4138 | 5 | -- | -- |
| 116.82 | 0.504 | 2.88 | -- | -- | -- | -- | -- | 0.0737 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.11 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 2 |
| 3 | 95.11 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 5 | 95.12 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 15 | 95.12 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 117 | 100.66 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 119 | 100.72 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 24 | 3 |
| 132 | 101.91 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 136 | 102.51 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 1 |
| 157 | 103.72 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 181 | 103.91 | wind | 9.0 | 30 | > th | dose dependent | rect. | 21 | 15 |
| 212 | 104.56 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 215 | 104.83 | wind | 9.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 218 | 105.26 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 220 | 105.29 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 260 | 105.67 | precipitation | 0.1 | 10 | > th | dose independent | sin | 13 | NA |
| 261 | 105.68 | precipitation | 0.1 | 10 | < th | dose independent | sin | 13 | NA |
| 262 | 105.68 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 13 | NA |
| 278 | 105.89 | wind | 9.0 | 30 | < th | dose independent | sin | 6 | NA |
| 288 | 105.94 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 12 | NA |
| 301 | 106.06 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 350 | 106.27 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 543 | 106.73 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 591 | 107.05 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 598 | 107.20 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 650 | 107.58 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 849 | 108.37 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 851 | 108.37 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 903 | 108.37 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 929 | 108.43 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 981 | 108.48 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 1 |