Os11g0299300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os11g0299300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.89 | 0.535 | 2.81 | 0.337 | 0.0397 | 0.685 | -0.366 | 0.275 | 0.261 | 6.86 | 20.1 | 1582 | -- | -- |
| 130.03 | 0.531 | 2.8 | 0.378 | 0.0482 | 0.642 | -0.367 | -- | 0.266 | 6.81 | 20 | 1581 | -- | -- |
| 130.09 | 0.531 | 2.81 | 0.337 | 0.0597 | 0.677 | -- | 0.247 | 0.261 | 3.63 | 20.04 | 1567 | -- | -- |
| 129.92 | 0.531 | 2.8 | 0.406 | 0.0614 | 0.634 | -- | -- | 0.281 | 2.27 | 19.98 | 2029 | -- | -- |
| 130.16 | 0.531 | 2.81 | 0.355 | -- | 0.663 | -- | 0.215 | 0.262 | -- | 20.1 | 1944 | -- | -- |
| 137.82 | 0.55 | 2.83 | 0.117 | 0.0462 | -- | -0.246 | -- | 0.138 | 6.19 | -- | -- | -- | -- |
| 137.88 | 0.55 | 2.83 | 0.113 | 0.0593 | -- | -- | -- | 0.139 | 3.52 | -- | -- | -- | -- |
| 130.21 | 0.531 | 2.8 | 0.394 | -- | 0.612 | -- | -- | 0.277 | -- | 20.01 | 1984 | -- | -- |
| 133.31 | 0.538 | 2.82 | -- | 0.0805 | 0.471 | -- | -- | 0.214 | 0.873 | 20.1 | 2027 | -- | -- |
| 138.07 | 0.549 | 2.83 | 0.116 | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
| 138.21 | 0.55 | 2.84 | -- | 0.0615 | -- | -- | -- | 0.126 | 3.51 | -- | -- | -- | -- |
| 133.25 | 0.538 | 2.82 | -- | -- | 0.438 | -- | -- | 0.215 | -- | 20.7 | 1618 | -- | -- |
| 138.42 | 0.549 | 2.84 | -- | -- | -- | -- | -- | 0.127 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.88 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 125.45 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 4 | 126.22 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 4 |
| 5 | 126.36 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 6 | 126.54 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 2 |
| 7 | 126.54 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 14 | 127.54 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 18 | 127.70 | radiation | 10.0 | 10 | < th | dose independent | rect. | 11 | 2 |
| 35 | 127.88 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 7 |
| 39 | 127.88 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 7 |
| 50 | 128.00 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 22 | 4 |
| 52 | 128.00 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 22 | 4 |
| 102 | 128.90 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 104 | 128.92 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 114 | 128.92 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 125 | 128.93 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 128 | 128.98 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 145 | 129.05 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 149 | 129.08 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 166 | 129.22 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 180 | 129.29 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 3 |
| 185 | 129.29 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 3 |
| 193 | 129.31 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 202 | 129.35 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 204 | 129.37 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 211 | 129.40 | temperature | 20.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 219 | 129.43 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 224 | 129.43 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 233 | 129.45 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 4 |
| 235 | 129.46 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 1 | 3 |
| 244 | 129.48 | temperature | 20.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 246 | 129.48 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 1 |
| 253 | 129.48 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 295 | 129.60 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 297 | 129.61 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 16 |
| 314 | 129.65 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 19 |
| 365 | 129.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 383 | 129.81 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 395 | 129.83 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 416 | 129.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 15 |
| 420 | 129.87 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 423 | 129.87 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 463 | 129.94 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 501 | 130.00 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 515 | 130.01 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 517 | 130.02 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 532 | 130.02 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 536 | 130.03 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 552 | 130.04 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 563 | 130.05 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 574 | 130.07 | temperature | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 582 | 130.08 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 626 | 130.11 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 640 | 130.13 | temperature | 20.0 | 720 | < th | dose independent | sin | 13 | NA |
| 683 | 130.15 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 765 | 130.24 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 2 | 7 |
| 788 | 130.25 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 18 |
| 790 | 130.26 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 870 | 130.29 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 904 | 130.31 | temperature | 15.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 929 | 130.32 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 954 | 130.34 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 980 | 130.36 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 15 |