Os11g0294300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0294300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.66 | 0.432 | 3.57 | 0.935 | 1.06 | -0.664 | 1.79 | -1.94 | 0.329 | 20.1 | 0.1874 | 4699 | -- | -- |
| 87.05 | 0.435 | 3.59 | 0.989 | 1.07 | -0.688 | 1.79 | -- | 0.333 | 20.1 | 0.9994 | 4706 | -- | -- |
| 93.89 | 0.451 | 3.56 | 0.896 | 1.06 | -0.665 | -- | -1.88 | 0.333 | 19.8 | 0.0004595 | 4737 | -- | -- |
| 96.08 | 0.457 | 3.59 | 0.958 | 1.06 | -0.655 | -- | -- | 0.338 | 19.8 | 1.143 | 4743 | -- | -- |
| 155.49 | 0.581 | 3.54 | 0.891 | -- | -0.625 | -- | -1.94 | 0.336 | -- | 0.3212 | 4798 | -- | -- |
| 94.81 | 0.456 | 3.6 | 1.16 | 1.05 | -- | 1.79 | -- | 0.27 | 20.2 | -- | -- | -- | -- |
| 104.04 | 0.478 | 3.6 | 1.11 | 1.06 | -- | -- | -- | 0.273 | 19.8 | -- | -- | -- | -- |
| 157.37 | 0.584 | 3.56 | 0.931 | -- | -0.661 | -- | -- | 0.332 | -- | 1.491 | 4742 | -- | -- |
| 118.02 | 0.506 | 3.61 | -- | 1.06 | -0.938 | -- | -- | 0.293 | 19.7 | 1.427 | 4697 | -- | -- |
| 165.4 | 0.601 | 3.57 | 1.1 | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
| 136.46 | 0.546 | 3.63 | -- | 1.06 | -- | -- | -- | 0.15 | 19.9 | -- | -- | -- | -- |
| 178.3 | 0.622 | 3.57 | -- | -- | -0.908 | -- | -- | 0.268 | -- | 3.542 | 4737 | -- | -- |
| 197.13 | 0.655 | 3.6 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.15 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 5 | 81.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 7 | 82.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 8 | 82.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 9 | 82.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 13 | 82.57 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 15 | 82.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 17 | 82.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 21 | 82.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 24 | 82.75 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 25 | 82.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 29 | 82.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 31 | 82.80 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 49 | 82.93 | temperature | 15.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 54 | 82.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 14 |
| 59 | 83.00 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 62 | 83.03 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 77 | 83.09 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 82 | 83.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 83 | 83.10 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 105 | 83.17 | humidity | 90.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 106 | 83.17 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 120 | 83.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 145 | 83.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 147 | 83.30 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 158 | 83.32 | wind | 1.0 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 184 | 83.37 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 195 | 83.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 4 |
| 203 | 83.42 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 219 | 83.45 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 242 | 83.50 | temperature | 15.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 324 | 83.65 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 356 | 83.70 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 11 | 17 |
| 380 | 83.75 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 413 | 83.80 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 436 | 83.83 | humidity | 90.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 465 | 83.86 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 480 | 83.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 494 | 83.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 510 | 83.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 537 | 83.93 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 581 | 83.97 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 19 |
| 585 | 83.98 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 592 | 83.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 614 | 84.00 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 651 | 84.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 655 | 84.04 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 706 | 84.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 747 | 84.12 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 752 | 84.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 21 |
| 787 | 84.15 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 794 | 84.15 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 802 | 84.16 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 835 | 84.18 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 861 | 84.20 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 865 | 84.20 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 19 |
| 941 | 84.27 | wind | 1.0 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 949 | 84.28 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 960 | 84.29 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 988 | 84.31 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 20 |