Os11g0293900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UBX domain containing protein.
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Os11g0293900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UBX domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.4 | 0.152 | 11.6 | 0.945 | 0.35 | -0.656 | -0.0307 | 0.767 | 0.466 | 18.2 | 15.2 | 374 | -- | -- |
| 10.86 | 0.153 | 11.6 | 0.828 | 0.333 | -0.57 | 0.0959 | -- | 0.438 | 18.4 | 16.56 | 402 | -- | -- |
| 10.4 | 0.15 | 11.6 | 0.948 | 0.35 | -0.65 | -- | 0.765 | 0.467 | 18.2 | 15.5 | 377 | -- | -- |
| 10.85 | 0.153 | 11.6 | 0.816 | 0.331 | -0.606 | -- | -- | 0.432 | 18.3 | 15.69 | 399 | -- | -- |
| 12.34 | 0.164 | 11.6 | 0.976 | -- | -0.515 | -- | 0.644 | 0.463 | -- | 13.61 | 1397 | -- | -- |
| 15.53 | 0.185 | 11.6 | 0.676 | 0.171 | -- | 0.0215 | -- | 0.336 | 19 | -- | -- | -- | -- |
| 15.53 | 0.185 | 11.6 | 0.676 | 0.171 | -- | -- | -- | 0.336 | 19 | -- | -- | -- | -- |
| 12.67 | 0.166 | 11.6 | 0.833 | -- | -0.505 | -- | -- | 0.426 | -- | 13.26 | 1398 | -- | -- |
| 26.65 | 0.24 | 11.6 | -- | 0.242 | -0.262 | -- | -- | 0.294 | 18.8 | 16.26 | 371 | -- | -- |
| 17.06 | 0.193 | 11.6 | 0.672 | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
| 27.57 | 0.246 | 11.6 | -- | 0.164 | -- | -- | -- | 0.261 | 19.2 | -- | -- | -- | -- |
| 28.21 | 0.247 | 11.6 | -- | -- | -0.14 | -- | -- | 0.293 | -- | 22 | 1398 | -- | -- |
| 28.99 | 0.251 | 11.6 | -- | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 5 | 10.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 14 | 10.48 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 15 | 10.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 18 | 10.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 22 | 10.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 49 | 10.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 61 | 10.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 17 |
| 79 | 10.63 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 84 | 10.64 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 106 | 10.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 132 | 10.67 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 175 | 10.72 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 240 | 10.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 244 | 10.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 17 |
| 259 | 10.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 15 |
| 282 | 10.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 298 | 10.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 302 | 10.82 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 323 | 10.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 359 | 10.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 360 | 10.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 361 | 10.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 391 | 10.86 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 446 | 10.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 467 | 10.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 470 | 10.89 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 471 | 10.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 486 | 10.89 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 521 | 10.91 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 560 | 10.92 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 605 | 10.93 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 958 | 10.98 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |