Os11g0291000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-D-xylosidase.
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Os11g0291000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-D-xylosidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.67 | 0.406 | 3.31 | 0.0887 | 0.112 | -1.24 | -0.0273 | -0.26 | -0.00559 | 11.2 | 1015 | 1361 | -- | -- |
| 74.7 | 0.403 | 3.31 | 0.0945 | 0.111 | -1.17 | -0.0209 | -- | -0.00525 | 11.2 | 1015 | 1373 | -- | -- |
| 74.67 | 0.402 | 3.31 | 0.088 | 0.112 | -1.24 | -- | -0.249 | -0.00541 | 11.3 | 1015 | 1362 | -- | -- |
| 74.33 | 0.402 | 3.31 | 0.0738 | 0.0945 | -1 | -- | -- | 0.00757 | 11 | 1014 | 1583 | -- | -- |
| 75.1 | 0.404 | 3.32 | 0.0638 | -- | -1 | -- | 0.0341 | -0.00507 | -- | 1014 | 1665 | -- | -- |
| 80.23 | 0.42 | 3.31 | 0.0568 | 0.133 | -- | -0.111 | -- | -0.031 | 11.4 | -- | -- | -- | -- |
| 80.28 | 0.42 | 3.31 | 0.0526 | 0.133 | -- | -- | -- | -0.0312 | 11.6 | -- | -- | -- | -- |
| 75.08 | 0.404 | 3.31 | 0.0693 | -- | -1.01 | -- | -- | -0.00274 | -- | 1014 | 1631 | -- | -- |
| 74.42 | 0.402 | 3.31 | -- | 0.114 | -0.976 | -- | -- | -0.00852 | 11 | 1014 | 1650 | -- | -- |
| 81.39 | 0.422 | 3.32 | 0.0489 | -- | -- | -- | -- | -0.0327 | -- | -- | -- | -- | -- |
| 80.35 | 0.419 | 3.31 | -- | 0.133 | -- | -- | -- | -0.037 | 11.6 | -- | -- | -- | -- |
| 75.2 | 0.404 | 3.31 | -- | -- | -1 | -- | -- | -0.0105 | -- | 1014 | 1631 | -- | -- |
| 81.46 | 0.421 | 3.32 | -- | -- | -- | -- | -- | -0.0382 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.39 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 5 | 67.44 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 10 | 67.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 13 | 67.49 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 17 | 67.49 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 23 | 67.49 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 24 | 67.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 44 | 67.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 50 | 67.63 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 52 | 67.72 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 53 | 67.75 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 54 | 67.83 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 55 | 67.83 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 62 | 67.95 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 63 | 67.96 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 66 | 68.01 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 69 | 68.09 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 74 | 68.12 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 76 | 68.12 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 77 | 68.12 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 81 | 68.12 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 83 | 68.12 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 88 | 68.12 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 89 | 68.12 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 90 | 68.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 91 | 68.12 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 96 | 68.12 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 100 | 68.25 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 103 | 68.64 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 104 | 68.71 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 107 | 69.03 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 120 | 69.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 158 | 71.02 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 161 | 71.37 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 166 | 71.93 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 173 | 72.20 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 182 | 72.46 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 186 | 72.55 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 189 | 72.68 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 199 | 72.81 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 239 | 73.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 243 | 73.11 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 13 |
| 248 | 73.14 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 268 | 73.29 | temperature | 25.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 281 | 73.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 282 | 73.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 294 | 73.37 | temperature | 15.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 299 | 73.39 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 304 | 73.40 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 310 | 73.41 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 349 | 73.53 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 355 | 73.54 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 368 | 73.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 395 | 73.62 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 441 | 73.73 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 492 | 73.84 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 499 | 73.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 515 | 73.88 | temperature | 15.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 529 | 73.91 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 534 | 73.92 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 14 | 7 |
| 558 | 73.96 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 579 | 74.00 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 583 | 74.00 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 654 | 74.10 | temperature | 30.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 728 | 74.20 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 738 | 74.21 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 800 | 74.30 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 6 |
| 801 | 74.30 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 817 | 74.32 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 11 |
| 875 | 74.40 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 890 | 74.42 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 902 | 74.44 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 8 | 1 |
| 939 | 74.48 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 951 | 74.49 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 16 |