Os11g0289700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os11g0289700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 583.54 | 1.13 | 5.7 | -6.19 | 1.89 | 1.03 | -2.5 | -2.8 | -0.347 | 10.6 | 19.98 | 89 | -- | -- |
| 597.64 | 1.14 | 5.7 | -6.11 | 2 | 1.11 | -0.394 | -- | -0.346 | 10.7 | 18.74 | 76 | -- | -- |
| 594.33 | 1.14 | 5.7 | -6.16 | 1.98 | 1.09 | -- | -0.979 | -0.354 | 10.6 | 18.73 | 81 | -- | -- |
| 598.26 | 1.14 | 5.7 | -6.13 | 2.01 | 1.12 | -- | -- | -0.352 | 10.7 | 18.73 | 76 | -- | -- |
| 661.37 | 1.2 | 5.75 | -6.19 | -- | 1.03 | -- | -2.82 | -0.21 | -- | 34.39 | 836 | -- | -- |
| 632.84 | 1.18 | 5.72 | -6.17 | 1.32 | -- | -0.781 | -- | -0.41 | 9.35 | -- | -- | -- | -- |
| 635.01 | 1.18 | 5.72 | -6.19 | 1.32 | -- | -- | -- | -0.41 | 9.43 | -- | -- | -- | -- |
| 682.05 | 1.22 | 5.72 | -6.21 | -- | 1.15 | -- | -- | -0.23 | -- | 38.97 | 844 | -- | -- |
| 1567.47 | 1.84 | 5.63 | -- | 1.91 | 1.1 | -- | -- | 0.266 | 11 | 20 | 90 | -- | -- |
| 736.63 | 1.27 | 5.76 | -6.2 | -- | -- | -- | -- | -0.406 | -- | -- | -- | -- | -- |
| 1646.01 | 1.9 | 5.57 | -- | 1.33 | -- | -- | -- | 0.28 | 9.78 | -- | -- | -- | -- |
| 1571.86 | 1.85 | 5.58 | -- | -- | 2.2 | -- | -- | 0.442 | -- | 10.08 | 1010 | -- | -- |
| 1751.06 | 1.95 | 5.6 | -- | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 558.02 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 3 | 559.84 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 6 | 561.63 | wind | 5 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 19 | 564.13 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 23 | 564.34 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 24 | 564.34 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 3 |
| 26 | 564.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 32 | 565.39 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 34 | 565.54 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 47 | 566.37 | radiation | 10 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 49 | 566.44 | temperature | 30 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 54 | 566.73 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 59 | 566.84 | temperature | 30 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 61 | 566.91 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 62 | 566.92 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 63 | 566.95 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 77 | 566.96 | radiation | 10 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 94 | 567.07 | temperature | 30 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 95 | 567.08 | temperature | 30 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 104 | 567.11 | temperature | 30 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 106 | 567.12 | temperature | 30 | 43200 | < th | dose independent | rect. | 22 | 13 |
| 135 | 567.52 | wind | 1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 140 | 567.58 | temperature | 30 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 144 | 567.68 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 163 | 567.75 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 164 | 567.79 | radiation | 10 | 43200 | > th | dose independent | sin | 5 | NA |
| 165 | 567.79 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 322 | 568.59 | temperature | 30 | 43200 | > th | dose dependent | sin | 8 | NA |
| 383 | 568.87 | temperature | 30 | 43200 | > th | dose independent | sin | 8 | NA |
| 399 | 568.94 | temperature | 30 | 43200 | < th | dose independent | sin | 8 | NA |
| 411 | 569.13 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 490 | 569.62 | humidity | 50 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 493 | 569.66 | temperature | 30 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 496 | 569.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 521 | 570.05 | temperature | 30 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 527 | 570.17 | humidity | 50 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 545 | 570.43 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 576 | 570.67 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 677 | 570.95 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 744 | 571.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 755 | 571.29 | radiation | 10 | 43200 | < th | dose dependent | rect. | 12 | 3 |
| 764 | 571.33 | temperature | 25 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 765 | 571.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 7 |
| 788 | 571.42 | radiation | 10 | 43200 | > th | dose independent | no | NA | NA |
| 923 | 571.75 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 936 | 571.87 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 1 |