Os11g0287000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0287000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.85 | 0.384 | 11.4 | -0.946 | 1.3 | -1.28 | -0.258 | -1.29 | -0.652 | 19.5 | 24.2 | 14 | -- | -- |
| 69.5 | 0.391 | 11.5 | -1.12 | 1.27 | -1.12 | -0.376 | -- | -0.73 | 19.6 | 25.63 | 21 | -- | -- |
| 67 | 0.384 | 11.4 | -0.934 | 1.3 | -1.29 | -- | -1.35 | -0.649 | 19.5 | 24.1 | 11 | -- | -- |
| 69.73 | 0.389 | 11.5 | -1.13 | 1.22 | -1.16 | -- | -- | -0.741 | 19.9 | 27.3 | 28 | -- | -- |
| 113.38 | 0.496 | 11.4 | -1.01 | -- | -1.86 | -- | -1.54 | -0.739 | -- | 31.2 | 500 | -- | -- |
| 88.57 | 0.441 | 11.4 | -0.855 | 1.29 | -- | -0.474 | -- | -0.493 | 18.8 | -- | -- | -- | -- |
| 89.14 | 0.442 | 11.4 | -0.847 | 1.29 | -- | -- | -- | -0.494 | 18.9 | -- | -- | -- | -- |
| 113.44 | 0.496 | 11.4 | -1.33 | -- | -1.96 | -- | -- | -0.826 | -- | 31.81 | 491 | -- | -- |
| 99.48 | 0.467 | 11.4 | -- | 1.28 | -0.72 | -- | -- | -0.534 | 19.3 | 25.7 | 3 | -- | -- |
| 176.36 | 0.621 | 11.4 | -0.875 | -- | -- | -- | -- | -0.519 | -- | -- | -- | -- | -- |
| 108.06 | 0.486 | 11.4 | -- | 1.3 | -- | -- | -- | -0.4 | 18.8 | -- | -- | -- | -- |
| 156.47 | 0.583 | 11.4 | -- | -- | -1.56 | -- | -- | -0.607 | -- | 65.15 | 480 | -- | -- |
| 196.56 | 0.654 | 11.3 | -- | -- | -- | -- | -- | -0.422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.22 | temperature | 15.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 5 | 63.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 7 | 63.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 11 | 63.48 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 17 | 63.74 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 33 | 64.19 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 19 |
| 37 | 64.24 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 39 | 64.26 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 74 | 64.51 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 114 | 64.92 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 138 | 65.08 | temperature | 20.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 167 | 65.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 197 | 65.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 217 | 65.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 225 | 65.69 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 232 | 65.77 | temperature | 30.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 288 | 66.18 | temperature | 30.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 355 | 66.66 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 365 | 66.72 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 371 | 66.76 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 378 | 66.80 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 388 | 66.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 403 | 66.89 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 405 | 66.90 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 436 | 67.05 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 443 | 67.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 446 | 67.12 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 453 | 67.15 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 16 |
| 533 | 67.32 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 540 | 67.34 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 542 | 67.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 552 | 67.39 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 553 | 67.39 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 555 | 67.40 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 579 | 67.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 580 | 67.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 581 | 67.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 591 | 67.48 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 619 | 67.55 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 626 | 67.57 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 651 | 67.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 655 | 67.62 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 661 | 67.63 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 8 |
| 676 | 67.66 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 677 | 67.66 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 683 | 67.69 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 688 | 67.70 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 796 | 67.91 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 862 | 67.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 943 | 68.12 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 945 | 68.13 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 950 | 68.14 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 953 | 68.15 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 981 | 68.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 983 | 68.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 991 | 68.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 998 | 68.21 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 7 |