Os11g0286800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpene synthase family protein.
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Os11g0286800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Terpene synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 348.4 | 0.877 | 4.67 | -0.672 | 1.58 | -5.01 | -0.416 | 7.61 | 0.488 | 15.1 | 19.11 | 5295 | 19.8 | -- |
| 370.67 | 0.897 | 4.78 | -1.24 | 1.39 | -5.85 | -0.734 | -- | 0.854 | 14.4 | 13.68 | 11229 | 20.8 | -- |
| 348.03 | 0.869 | 4.66 | -0.583 | 1.73 | -5.1 | -- | 8.12 | 0.503 | 15.2 | 19.21 | 5177 | 19.8 | -- |
| 370.48 | 0.896 | 4.76 | -1.34 | 1.36 | -5.84 | -- | -- | 0.821 | 14.5 | 13.3 | 11197 | 20.2 | -- |
| 459.48 | 0.998 | 4.42 | -0.316 | -- | -5.06 | -- | 6.75 | 1.31 | -- | 17.76 | 9823 | 19.4 | -- |
| 902.7 | 1.41 | 5.19 | -4.95 | 1.59 | -- | -0.173 | -- | -1.04 | 13.8 | -- | -- | -- | -- |
| 902.81 | 1.41 | 5.19 | -4.96 | 1.59 | -- | -- | -- | -1.04 | 13.8 | -- | -- | -- | -- |
| 411.83 | 0.945 | 4.65 | -1.45 | -- | -6.67 | -- | -- | 0.919 | -- | 6.192 | 10941 | 11 | -- |
| 396.99 | 0.928 | 4.61 | -- | 1.53 | -6.47 | -- | -- | 1.49 | 13.2 | 12.11 | 13184 | 0.0459 | -- |
| 1055.49 | 1.52 | 5.21 | -5.02 | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
| 1550.61 | 1.84 | 5.06 | -- | 1.68 | -- | -- | -- | -0.484 | 13.9 | -- | -- | -- | -- |
| 394.85 | 0.925 | 4.63 | -- | -- | -7.67 | -- | -- | 1.51 | -- | -24.25 | 13379 | 7.6 | -- |
| 1720.99 | 1.94 | 5.08 | -- | -- | -- | -- | -- | -0.516 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 342.88 | temperature | 20 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 9 | 345.79 | temperature | 20 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 30 | 347.27 | temperature | 25 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 41 | 348.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 58 | 349.17 | temperature | 20 | 14400 | > th | dose dependent | sin | 22 | NA |
| 82 | 349.92 | temperature | 25 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 177 | 352.02 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 187 | 352.18 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 196 | 352.37 | temperature | 25 | 14400 | < th | dose independent | sin | 23 | NA |
| 204 | 352.54 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 206 | 352.55 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 221 | 352.81 | temperature | 25 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 224 | 352.83 | temperature | 25 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 266 | 353.38 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 289 | 353.75 | temperature | 25 | 14400 | > th | dose independent | sin | 23 | NA |
| 568 | 356.49 | temperature | 20 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 620 | 356.83 | temperature | 20 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 632 | 356.90 | temperature | 20 | 14400 | > th | dose independent | sin | 15 | NA |
| 645 | 357.03 | temperature | 20 | 14400 | > th | dose independent | rect. | 14 | 14 |
| 654 | 357.06 | temperature | 15 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 656 | 357.07 | temperature | 15 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 676 | 357.15 | temperature | 15 | 14400 | > th | dose dependent | no | NA | NA |
| 693 | 357.24 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 746 | 357.58 | temperature | 20 | 14400 | > th | dose independent | rect. | 11 | 18 |
| 835 | 358.22 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 937 | 358.86 | temperature | 20 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 945 | 358.91 | temperature | 20 | 14400 | < th | dose independent | sin | 16 | NA |
| 983 | 359.16 | temperature | 20 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 994 | 359.26 | temperature | 20 | 14400 | < th | dose independent | rect. | 15 | 12 |