Os11g0282900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0282900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 302.46 | 0.817 | 4.23 | -1.05 | 0.479 | -1.4 | 0.0489 | -1.41 | -0.366 | 10.7 | 24.8 | 3392 | -- | -- |
| 304.63 | 0.813 | 4.27 | -1.29 | 0.484 | -1.21 | 0.00418 | -- | -0.427 | 10.6 | 25.34 | 3399 | -- | -- |
| 302.4 | 0.81 | 4.22 | -1.04 | 0.477 | -1.44 | -- | -1.52 | -0.362 | 10.7 | 24.12 | 3401 | -- | -- |
| 304.61 | 0.813 | 4.27 | -1.31 | 0.478 | -1.21 | -- | -- | -0.423 | 10.7 | 25.31 | 3415 | -- | -- |
| 314.96 | 0.831 | 4.24 | -0.916 | -- | -1.28 | -- | -0.884 | -0.283 | -- | 24.12 | 3401 | -- | -- |
| 328.03 | 0.849 | 4.2 | -0.759 | 0.432 | -- | 0.0099 | -- | -0.112 | 10.6 | -- | -- | -- | -- |
| 328.03 | 0.848 | 4.2 | -0.759 | 0.432 | -- | -- | -- | -0.112 | 10.6 | -- | -- | -- | -- |
| 316.18 | 0.832 | 4.26 | -1.02 | -- | -1.15 | -- | -- | -0.342 | -- | 25.31 | 3415 | -- | -- |
| 335.4 | 0.858 | 4.21 | -- | 0.341 | -0.69 | -- | -- | -0.15 | 9.65 | 25.31 | 3415 | -- | -- |
| 339.53 | 0.861 | 4.21 | -0.767 | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
| 343.2 | 0.867 | 4.18 | -- | 0.438 | -- | -- | -- | -0.0271 | 10.7 | -- | -- | -- | -- |
| 341.94 | 0.864 | 4.23 | -- | -- | -0.828 | -- | -- | -0.173 | -- | 25.31 | 3415 | -- | -- |
| 355.04 | 0.879 | 4.19 | -- | -- | -- | -- | -- | -0.0286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 291.92 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 2 | 292.96 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 5 | 293.28 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 6 | 293.31 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 7 | 293.32 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 16 |
| 8 | 293.32 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 13 | 293.45 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 17 | 293.54 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 16 |
| 68 | 294.18 | wind | 3 | 14400 | < th | dose independent | sin | 2 | NA |
| 69 | 294.18 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 70 | 294.18 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 84 | 294.28 | wind | 3 | 14400 | < th | dose dependent | sin | 2 | NA |
| 96 | 294.39 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 104 | 294.48 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 16 |
| 107 | 294.49 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 108 | 294.50 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 109 | 294.51 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 122 | 294.59 | wind | 3 | 14400 | > th | dose independent | sin | 2 | NA |
| 145 | 294.75 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 22 |
| 166 | 294.89 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 177 | 294.96 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 21 |
| 186 | 295.03 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 196 | 295.09 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 201 | 295.10 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 206 | 295.14 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 4 | NA |
| 213 | 295.16 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 237 | 295.25 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 275 | 295.38 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 299 | 295.45 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 318 | 295.53 | wind | 3 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 329 | 295.58 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 341 | 295.62 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 350 | 295.67 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 383 | 295.81 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 391 | 295.84 | humidity | 60 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 423 | 295.98 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 424 | 295.98 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 429 | 295.99 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 438 | 296.03 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 460 | 296.11 | wind | 3 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 471 | 296.14 | wind | 3 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 475 | 296.15 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 480 | 296.19 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 488 | 296.22 | humidity | 80 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 492 | 296.24 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 496 | 296.25 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 509 | 296.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 515 | 296.32 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 519 | 296.34 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 526 | 296.37 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 550 | 296.45 | wind | 3 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 565 | 296.51 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 594 | 296.58 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 602 | 296.61 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 608 | 296.62 | wind | 3 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 687 | 296.81 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 688 | 296.81 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 689 | 296.81 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 718 | 296.87 | humidity | 50 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 721 | 296.88 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 740 | 296.93 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 782 | 297.00 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 810 | 297.04 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 828 | 297.08 | wind | 3 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 840 | 297.12 | wind | 3 | 14400 | < th | dose independent | no | NA | NA |
| 867 | 297.14 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 870 | 297.15 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 12 | NA |
| 872 | 297.15 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 21 |
| 906 | 297.20 | wind | 3 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 942 | 297.25 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 973 | 297.29 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 983 | 297.31 | wind | 3 | 14400 | > th | dose independent | no | NA | NA |