Os11g0278300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os11g0278300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 511.05 | 1.06 | 6.45 | 0.193 | 1.61 | 2.1 | -0.699 | 1.07 | 2.22 | 1.25 | 70.5 | 1351 | -- | -- |
| 513.46 | 1.06 | 6.42 | 0.361 | 1.6 | 2.17 | -0.778 | -- | 2.27 | 1.27 | 70.95 | 1352 | -- | -- |
| 512.92 | 1.05 | 6.45 | 0.207 | 1.61 | 2.11 | -- | 1.16 | 2.22 | 1.14 | 70.67 | 1351 | -- | -- |
| 515.77 | 1.06 | 6.42 | 0.394 | 1.6 | 2.19 | -- | -- | 2.28 | 1.14 | 70.78 | 1351 | -- | -- |
| 602.2 | 1.14 | 6.43 | 0.135 | -- | 2.44 | -- | 1.26 | 2.22 | -- | 73 | 1588 | -- | -- |
| 694.44 | 1.24 | 6.5 | -0.145 | 1.36 | -- | -1.27 | -- | 1.96 | 1.21 | -- | -- | -- | -- |
| 700.55 | 1.24 | 6.49 | -0.098 | 1.36 | -- | -- | -- | 1.97 | 0.923 | -- | -- | -- | -- |
| 603.91 | 1.14 | 6.4 | 0.34 | -- | 2.61 | -- | -- | 2.29 | -- | 73.54 | 1589 | -- | -- |
| 519.73 | 1.06 | 6.43 | -- | 1.61 | 2.13 | -- | -- | 2.23 | 1.13 | 70.57 | 1351 | -- | -- |
| 816.02 | 1.33 | 6.47 | -0.0475 | -- | -- | -- | -- | 1.99 | -- | -- | -- | -- | -- |
| 700.81 | 1.24 | 6.49 | -- | 1.36 | -- | -- | -- | 1.98 | 0.92 | -- | -- | -- | -- |
| 606.9 | 1.15 | 6.41 | -- | -- | 2.57 | -- | -- | 2.24 | -- | 73.38 | 1590 | -- | -- |
| 816.08 | 1.33 | 6.47 | -- | -- | -- | -- | -- | 2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 498.07 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 2 | 498.69 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 6 | 500.00 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 15 | 502.19 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 21 | 503.12 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 24 | 503.79 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 37 | 505.10 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 38 | 505.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 106 | 509.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 133 | 510.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 134 | 510.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 162 | 511.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 167 | 511.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 170 | 511.42 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 199 | 512.20 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 210 | 512.63 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 215 | 512.67 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 218 | 512.92 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 22 |
| 225 | 512.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 232 | 512.96 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 246 | 512.99 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 249 | 513.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 250 | 513.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 251 | 513.00 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 257 | 513.02 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 261 | 513.02 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 310 | 513.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 337 | 513.94 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 346 | 513.99 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 405 | 515.17 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 421 | 515.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 460 | 515.95 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 529 | 516.01 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 538 | 516.08 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 688 | 517.58 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 715 | 517.97 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 18 | 21 |
| 772 | 518.57 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 878 | 519.77 | humidity | 60.0 | 1440 | > th | dose dependent | no | NA | NA |
| 897 | 519.94 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 974 | 520.56 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |