Os11g0274100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0274100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.34 | 0.615 | 3.62 | -0.749 | 1.08 | 1.1 | -0.963 | -0.177 | 0.41 | 8.04 | 20.74 | 931 | -- | -- |
| 170.96 | 0.609 | 3.63 | -0.687 | 1.08 | 1.08 | -0.894 | -- | 0.398 | 8.09 | 21.2 | 954 | -- | -- |
| 173.86 | 0.614 | 3.62 | -0.713 | 1.09 | 1.14 | -- | 0.0988 | 0.419 | 8.14 | 20.7 | 930 | -- | -- |
| 173.56 | 0.614 | 3.62 | -0.712 | 1.09 | 1.08 | -- | -- | 0.396 | 8.16 | 21.24 | 939 | -- | -- |
| 229.15 | 0.705 | 3.65 | -0.751 | -- | 1.09 | -- | 0.0139 | 0.443 | -- | 20.76 | 1369 | -- | -- |
| 206.98 | 0.674 | 3.56 | -0.27 | 0.975 | -- | -1.12 | -- | 0.685 | 7.51 | -- | -- | -- | -- |
| 210.35 | 0.679 | 3.56 | -0.294 | 0.971 | -- | -- | -- | 0.688 | 7.69 | -- | -- | -- | -- |
| 228.99 | 0.705 | 3.65 | -0.772 | -- | 1.17 | -- | -- | 0.421 | -- | 20.73 | 1383 | -- | -- |
| 185.08 | 0.634 | 3.59 | -- | 1.08 | 0.869 | -- | -- | 0.521 | 8.11 | 21.3 | 895 | -- | -- |
| 261.19 | 0.755 | 3.58 | -0.281 | -- | -- | -- | -- | 0.702 | -- | -- | -- | -- | -- |
| 212.63 | 0.682 | 3.55 | -- | 0.969 | -- | -- | -- | 0.721 | 7.71 | -- | -- | -- | -- |
| 239.2 | 0.72 | 3.63 | -- | -- | 0.776 | -- | -- | 0.508 | -- | 22.2 | 1365 | -- | -- |
| 263.28 | 0.757 | 3.58 | -- | -- | -- | -- | -- | 0.733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.13 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 3 |
| 2 | 169.31 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 16 |
| 4 | 170.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 13 |
| 6 | 170.47 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 9 | 170.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 17 |
| 13 | 170.68 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 16 | 170.76 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 8 |
| 51 | 171.70 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 52 | 171.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 71 | 172.02 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 76 | 172.14 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 13 |
| 79 | 172.19 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 11 |
| 96 | 172.39 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 12 |
| 101 | 172.46 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 17 |
| 106 | 172.51 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 19 |
| 119 | 172.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 156 | 172.96 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 3 |
| 169 | 173.02 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 193 | 173.25 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 12 |
| 243 | 173.59 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 247 | 173.61 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 17 |
| 250 | 173.63 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 305 | 173.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 340 | 174.05 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 368 | 174.20 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 416 | 174.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 453 | 174.61 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 476 | 174.71 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 508 | 174.88 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 539 | 174.97 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 567 | 175.15 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 569 | 175.16 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 23 |
| 588 | 175.27 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 23 |
| 590 | 175.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 610 | 175.40 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 660 | 175.62 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 841 | 176.53 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 844 | 176.54 | humidity | 80 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 881 | 176.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 960 | 176.98 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 3 | 6 |