Os11g0270700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0270700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.96 | 0.642 | 6.54 | -1.41 | 0.363 | -2.24 | 1.52 | 1.97 | -0.341 | 4.75 | 15.81 | 89 | 20.9 | -- |
| 190.74 | 0.643 | 6.52 | -1.51 | 0.995 | -2.75 | 2.16 | -- | -0.326 | 6.59 | 12.12 | 99 | 21.7 | -- |
| 192.49 | 0.646 | 6.54 | -1.46 | 0.558 | -2.47 | -- | 1.62 | -0.362 | 6.63 | 14.06 | 90 | 21.1 | -- |
| 196.28 | 0.653 | 6.57 | -1.57 | 0.288 | -2.43 | -- | -- | -0.398 | 7.6 | 14.42 | 89 | 20.4 | -- |
| 194.66 | 0.65 | 6.57 | -1.47 | -- | -2.29 | -- | 1.41 | -0.387 | -- | 15.79 | 120 | 20.4 | -- |
| 232.01 | 0.714 | 6.65 | -1.88 | 1.47 | -- | -0.0352 | -- | -0.595 | 23.8 | -- | -- | -- | -- |
| 232.01 | 0.713 | 6.65 | -1.88 | 1.47 | -- | -- | -- | -0.595 | 23.8 | -- | -- | -- | -- |
| 196.6 | 0.653 | 6.57 | -1.57 | -- | -2.29 | -- | -- | -0.406 | -- | 15.69 | 85 | 19.9 | -- |
| 257.2 | 0.747 | 6.49 | -- | 0.696 | -3.04 | -- | -- | -0.162 | 8.85 | 14.97 | 99 | 20.9 | -- |
| 368.34 | 0.897 | 6.61 | -1.84 | -- | -- | -- | -- | -0.576 | -- | -- | -- | -- | -- |
| 325.35 | 0.844 | 6.6 | -- | 1.45 | -- | -- | -- | -0.385 | 23.7 | -- | -- | -- | -- |
| 259.07 | 0.75 | 6.53 | -- | -- | -2.54 | -- | -- | -0.175 | -- | 18.02 | 98 | 20.3 | -- |
| 457.49 | 0.998 | 6.57 | -- | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 7 | 185.34 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 6 |
| 14 | 187.17 | temperature | 15 | 90 | > th | dose dependent | sin | 3 | NA |
| 25 | 188.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 32 | 188.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 54 | 190.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 56 | 190.71 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 58 | 190.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 60 | 190.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 78 | 191.46 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 12 |
| 116 | 192.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 161 | 193.98 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 12 |
| 314 | 197.00 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 6 |
| 338 | 197.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 14 |
| 354 | 197.50 | temperature | 25 | 270 | > th | dose independent | sin | 4 | NA |
| 358 | 197.54 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 504 | 199.32 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 8 |
| 506 | 199.33 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 16 |
| 634 | 200.42 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 5 |
| 640 | 200.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 755 | 201.16 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 8 |
| 797 | 201.38 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 857 | 201.68 | temperature | 20 | 720 | < th | dose independent | rect. | 6 | 1 |
| 965 | 202.16 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 18 |
| 990 | 202.30 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 1 |