Os11g0267300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0267300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.3 | 0.413 | 12 | -0.625 | 1.95 | -0.955 | 0.614 | 0.209 | -0.385 | 7.5 | 16.34 | 14 | -- | -- |
| 77.46 | 0.41 | 12 | -0.629 | 1.96 | -0.956 | 0.47 | -- | -0.396 | 7.49 | 16.76 | 16 | -- | -- |
| 78.08 | 0.412 | 12 | -0.617 | 1.96 | -0.943 | -- | -0.000601 | -0.385 | 7.52 | 16.6 | 13 | -- | -- |
| 78.07 | 0.412 | 12 | -0.623 | 1.96 | -0.948 | -- | -- | -0.395 | 7.51 | 16.93 | 16 | -- | -- |
| 233.27 | 0.715 | 12.1 | -0.556 | -- | -1.49 | -- | -0.0715 | -0.361 | -- | 7.732 | 9 | -- | -- |
| 92.48 | 0.451 | 12 | -0.606 | 2.53 | -- | 0.361 | -- | -0.351 | 8.94 | -- | -- | -- | -- |
| 92.92 | 0.451 | 12 | -0.593 | 2.53 | -- | -- | -- | -0.351 | 8.94 | -- | -- | -- | -- |
| 232.36 | 0.71 | 12.1 | -0.555 | -- | -1.51 | -- | -- | -0.376 | -- | 7.375 | 6 | -- | -- |
| 88.16 | 0.437 | 12 | -- | 1.97 | -0.924 | -- | -- | -0.336 | 7.56 | 16.73 | 20 | -- | -- |
| 458.61 | 1 | 12.1 | -0.595 | -- | -- | -- | -- | -0.334 | -- | -- | -- | -- | -- |
| 102.2 | 0.473 | 12 | -- | 2.53 | -- | -- | -- | -0.285 | 8.96 | -- | -- | -- | -- |
| 239.98 | 0.722 | 12 | -- | -- | -1.51 | -- | -- | -0.146 | -- | 6.461 | 2 | -- | -- |
| 467.95 | 1.01 | 12.1 | -- | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.22 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 2 | 73.24 | radiation | 10.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 12 | 74.31 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 10 |
| 37 | 75.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 45 | 75.49 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 2 | 18 |
| 68 | 76.04 | radiation | 1.0 | 30 | > th | dose independent | sin | 0 | NA |
| 76 | 76.17 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 81 | 76.35 | radiation | 10.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 84 | 76.37 | radiation | 1.0 | 30 | < th | dose independent | sin | 0 | NA |
| 87 | 76.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 100 | 76.63 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 102 | 76.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 22 |
| 104 | 76.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 107 | 76.74 | radiation | 10.0 | 10 | < th | dose independent | rect. | 10 | 10 |
| 125 | 76.88 | temperature | 20.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 128 | 76.89 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 130 | 76.90 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 135 | 76.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 142 | 77.02 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 147 | 77.07 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 151 | 77.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 19 |
| 153 | 77.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 19 |
| 155 | 77.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 158 | 77.14 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 162 | 77.17 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 187 | 77.35 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 188 | 77.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 207 | 77.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 225 | 77.59 | radiation | 10.0 | 30 | < th | dose independent | rect. | 2 | 18 |
| 228 | 77.60 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 237 | 77.64 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 245 | 77.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 251 | 77.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 252 | 77.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 254 | 77.71 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 256 | 77.71 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 257 | 77.71 | radiation | 30.0 | 30 | < th | dose independent | rect. | 2 | 18 |
| 258 | 77.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 259 | 77.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 263 | 77.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 265 | 77.72 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 268 | 77.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 292 | 77.81 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 6 |
| 312 | 77.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 314 | 77.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 19 |
| 327 | 77.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 333 | 77.97 | humidity | 60.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 338 | 77.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 345 | 78.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 21 |
| 348 | 78.00 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 365 | 78.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 371 | 78.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 14 |
| 373 | 78.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 14 |
| 396 | 78.16 | radiation | 40.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 418 | 78.23 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 16 | 4 |
| 435 | 78.27 | radiation | 10.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 444 | 78.29 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 455 | 78.31 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 457 | 78.32 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 458 | 78.32 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 462 | 78.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 464 | 78.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 465 | 78.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 14 |
| 470 | 78.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 475 | 78.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 5 |
| 476 | 78.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 483 | 78.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 3 |
| 485 | 78.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 486 | 78.38 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 502 | 78.43 | radiation | 10.0 | 90 | > th | dose independent | rect. | 11 | 5 |
| 503 | 78.43 | radiation | 10.0 | 90 | > th | dose independent | rect. | 6 | 10 |
| 524 | 78.45 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 20 |
| 527 | 78.45 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 574 | 78.55 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 22 |
| 585 | 78.60 | radiation | 30.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 588 | 78.61 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 590 | 78.61 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 594 | 78.61 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 20 |
| 599 | 78.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 14 |
| 655 | 78.77 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 661 | 78.78 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 4 |
| 662 | 78.78 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 4 |
| 665 | 78.79 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 670 | 78.80 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 676 | 78.82 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 5 |
| 709 | 78.89 | wind | 1.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 712 | 78.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 713 | 78.90 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 20 |
| 714 | 78.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 721 | 78.92 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 20 |
| 728 | 78.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 735 | 78.95 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 736 | 78.96 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 750 | 79.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 763 | 79.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 766 | 79.04 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 774 | 79.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 782 | 79.05 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 792 | 79.06 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 17 |
| 833 | 79.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 20 |
| 849 | 79.16 | humidity | 80.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 890 | 79.21 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 893 | 79.21 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 897 | 79.22 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 14 |
| 904 | 79.23 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 920 | 79.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 933 | 79.30 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 945 | 79.32 | humidity | 80.0 | 90 | < th | dose independent | rect. | 11 | 4 |
| 949 | 79.33 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 13 |