Os11g0267100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0267100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.1 | 0.444 | 8.07 | -1.09 | 2.46 | 1.7 | -0.386 | -0.346 | -0.452 | 7.94 | 28.93 | 121 | -- | -- |
| 89 | 0.439 | 8.08 | -1.14 | 2.45 | 1.7 | -0.341 | -- | -0.457 | 7.88 | 28.07 | 148 | -- | -- |
| 89.25 | 0.44 | 8.08 | -1.12 | 2.44 | 1.68 | -- | -0.23 | -0.456 | 7.85 | 28.05 | 148 | -- | -- |
| 88.7 | 0.439 | 8.08 | -1.16 | 2.44 | 1.65 | -- | -- | -0.458 | 7.63 | 26.51 | 225 | -- | -- |
| 302.84 | 0.811 | 8.06 | -0.382 | -- | 3.69 | -- | -2.11 | -0.155 | -- | 65.99 | 490 | -- | -- |
| 128.6 | 0.532 | 8.16 | -1.59 | 2.68 | -- | -0.0812 | -- | -0.819 | 7.2 | -- | -- | -- | -- |
| 128.62 | 0.531 | 8.16 | -1.59 | 2.68 | -- | -- | -- | -0.818 | 7.2 | -- | -- | -- | -- |
| 305.25 | 0.814 | 8.09 | -0.725 | -- | 3.59 | -- | -- | -0.21 | -- | 32.6 | 481 | -- | -- |
| 119.85 | 0.51 | 8.03 | -- | 2.34 | 2.16 | -- | -- | -0.228 | 7.92 | 27.17 | 217 | -- | -- |
| 507.8 | 1.05 | 8.22 | -1.54 | -- | -- | -- | -- | -0.772 | -- | -- | -- | -- | -- |
| 195.04 | 0.653 | 8.12 | -- | 2.66 | -- | -- | -- | -0.642 | 7.24 | -- | -- | -- | -- |
| 317.72 | 0.83 | 8.06 | -- | -- | 3.82 | -- | -- | -0.0797 | -- | 32.04 | 487 | -- | -- |
| 570.24 | 1.11 | 8.18 | -- | -- | -- | -- | -- | -0.601 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.46 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 3 | 86.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 5 | 87.21 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 11 | 87.70 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 12 | 87.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 28 | 88.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 30 | 88.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 37 | 88.52 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 38 | 88.63 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 67 | 89.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 70 | 89.63 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 73 | 89.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 77 | 89.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 78 | 89.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 79 | 89.76 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 91 | 89.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 109 | 89.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 121 | 90.04 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 124 | 90.08 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 125 | 90.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 127 | 90.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 166 | 90.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 173 | 90.31 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 186 | 90.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 13 |
| 247 | 90.66 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 330 | 90.97 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 416 | 91.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 5 |
| 418 | 91.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 429 | 91.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 506 | 91.51 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 562 | 91.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 690 | 91.93 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 804 | 92.16 | humidity | 60 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 836 | 92.23 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 898 | 92.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 930 | 92.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |